DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp4 and EIF4B

DIOPT Version :10

Sequence 1:NP_476935.1 Gene:Rbp4 / 41668 FlyBaseID:FBgn0010258 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001287750.1 Gene:EIF4B / 1975 HGNCID:3285 Length:616 Species:Homo sapiens


Alignment Length:417 Identity:82/417 - (19%)
Similarity:132/417 - (31%) Gaps:143/417 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FIGGLSTQTTVETLRGFFSQFGIVADAVVL-RDPVSNHSR--GFGFVTYVDPKSVEIVQRARPHT 96
            |:|.|....|.|:::.||.  |:...||.| |:| ||..|  |||:..:.|..|:.........:
Human    99 FLGNLPYDVTEESIKEFFR--GLNISAVRLPREP-SNPERLKGFGYAEFEDLDSLLSALSLNEES 160

  Fly    97 IDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSK-------RIFLGGLKEY----HDEN 150
            :.|:.:....|...||..|..      .|||.:....:.|       |.......:|    .|::
Human   161 LGNRRIRVDVADQAQDKDRDD------RSFGRDRNRDSDKTDTDWRARPATDSFDDYPPRRGDDS 219

  Fly   151 IVREYFSQF---------------GPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHW 200
            ...:|..::               ||    :..|||..||.|      :.|              
Human   220 FGDKYRDRYDSDRYRDGYRDGYRDGP----RRDMDRYGGRDR------YDD-------------- 260

  Fly   201 ILQTLVEVKRSTQKADRRFRFPIFSSVRA---GYIPPQPATADSYNYNNPNY------------- 249
                     |.::..||.:...|.|..||   ||     ...|.|......|             
Human   261 ---------RGSRDYDRGYDSRIGSGRRAFGSGY-----RRDDDYRGGGDRYEDRYDRRDDRSWS 311

  Fly   250 -------NPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMWS 307
                   :.|......||.       ...:.:.|:.||.::.:::..||.....|:.|....:.:
Human   312 SRDDYSRDDYRRDDRGPPQ-------RPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKPVDT 369

  Fly   308 SYPKTGI----YSAQE---------------------WTSSKVAE-WGPKAGHKHAQT---STND 343
            :..:..:    ...||                     |.|.:..| ...:.|.:.:||   :|:.
Human   370 AAREREVEERLQKEQEKLQRQLDEPKLERRPRERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434

  Fly   344 RAKIDL--------KELQAATFNNKLD 362
            |:|.|.        |.|:..|.|.:.|
Human   435 RSKSDQDARRRESEKSLENETLNKEED 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp4NP_476935.1 RRM_SF 34..105 CDD:473069 22/72 (31%)
RRM2_hnRNPA_like 137..209 CDD:409766 13/90 (14%)
EIF4BNP_001287750.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..93
RRM_eIF4B 94..175 CDD:409836 23/78 (29%)
PRK12678 <158..>273 CDD:237171 25/153 (16%)
PTZ00108 <372..613 CDD:240271 17/90 (19%)
Blue background indicates that the domain is not in the aligned region.

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