Protein Alignment sqd and LOC1274558

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_313699.4
• Gene: LOC1274558 / 1274558
• VectorBaseID: AGAMI1_004491
• Length: 390
• Species: Anopheles gambiae
• Alignment Length: 267
• Identity: 50/267 - (18%)
• Similarity: 97/267 - (36%)
• Gaps: 60/267 - (22%)

  Fly    50 GQRDDD--------RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN 106
            |.|:.|        |.:|||.:.::.||:.|::.|.:.|.:.|:.:..|.:||:.:|:.|..:.:
Mosquito     2 GDRNHDPGIMDKSMRSVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKD 66

  Fly   107 TEA-------------------IDKV--------SAADEHIINSKKVDPKKAKARHGKIFVGGLT 144
            .|.                   :|..        .||..|:..::....:....:|....:....
Mosquito    67 KETALSAMRNLNGYVFGGRPLRVDNACTEKSRMEMAALLHVNRAESPYGEHCSPQHAPEVITKHV 131

  Fly   145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVD-- 207
            :.:..|.:.....|...:|:.. ||:.:        .:...:.|:...||:.   ::..|.:|
Mosquito   132 SSLPPERLHELMLQMKQLVQTN-PFEAR--------HMLVQNPQLAYALLQV---QVLTKAIDPA 184

  Fly   208 -------VKRATPKPENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYG 265
                   ..::.|.......|..   |:|||:|..|.:..:.|.|| .:.:..........|...
Mosquito   185 AAYSFLYKSQSAPGFSEPFQGNQ---PQGGMQGNAGQFMPQYGANN-GNAESFRPNVDPRLGRQA 245

  Fly   266 AGGYGDY 272
            |.|..||
Mosquito   246 ASGANDY 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	19/97 (20%)
		RRM2_hnRNPD_like	137..211	CDD:240775	10/82 (12%)
LOC1274558	XP_313699.4	None