DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R1 and ghsra

DIOPT Version :9

Sequence 1:NP_731790.1 Gene:PK2-R1 / 41639 FlyBaseID:FBgn0038140 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001139744.1 Gene:ghsra / 795753 ZFINID:ZDB-GENE-070912-238 Length:360 Species:Danio rerio


Alignment Length:345 Identity:117/345 - (33%)
Similarity:172/345 - (49%) Gaps:49/345 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 NASTMAADSPVD-ESLTLRTALTVCYALIFVAGVLGNLITCIVISRNNFMHTATNFYLFNLAVSD 153
            ||:....:.||: ..:.:.|.:||...|.|..||.|||:|.:|:::...|.|.||.||.::|.||
Zfish    19 NATYWGIEQPVNIFPIPVLTGVTVTCVLFFFVGVTGNLMTILVVTKYKDMRTTTNLYLSSMAFSD 83

  Fly   154 LILLVSGIPQELYNLWYPDMYPFTDAMCIMGSVLSEMAANATVLTITAFTVERYIAICHPFRQHT 218
            |::.:. :|.:||.:|....:.|.:.:|.:...:||....:|:|.|||.:||||.|||.|.|...
Zfish    84 LLIFLC-MPLDLYRIWRYRPWNFGNILCKLFQFVSECCTYSTILNITALSVERYFAICFPLRAKV 147

  Fly   219 MSKLSRAIKFIFAIWLAAFLLALPQAMQFSVVYQNEGYSCTMENDFYAHVFAV-SGF-------- 274
            :....|....|..:|:.:|..|.|..:...|.::| |.:....|:..|..:|: ||.        
Zfish   148 VVTKGRVRGVILVLWIVSFFSAGPVFVLVGVEHEN-GTNSWDTNECKATEYAIRSGLLTIMVWVS 211

  Fly   275 -IFFGGPMTAICVLYVLIGVKL-KRSRLLQSLPRRTFDANRGLNAQGR------VIRMLVAVAVA 331
             |||..|:..:.|||.|||.|| ||.|           ...|.||..|      .::||..|..|
Zfish   212 SIFFFLPVFCLTVLYSLIGRKLWKRKR-----------ETIGENASSRDKSNRQTVKMLAVVVFA 265

  Fly   332 FFLCWAPFHAQRLM----AVYGLNLINIGISRDAFNDYFRILDYTSGVLYFLSTCINPLLYNIMS 392
            |.|||.|||..|.:    ...|..:::|      .:.|..::.:   ||::||..|||:||||||
Zfish   266 FVLCWLPFHVGRYLISKSTEMGSPVMSI------ISHYCNLISF---VLFYLSAAINPILYNIMS 321

  Fly   393 HKFREAFKITLTRQFGLARN 412
            .|:|.|    ..:.||| ||
Zfish   322 KKYRMA----ACKLFGL-RN 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R1NP_731790.1 7tm_4 114..>242 CDD:304433 46/127 (36%)
7tm_1 124..388 CDD:278431 92/284 (32%)
ghsraNP_001139744.1 7tm_4 49..333 CDD:304433 103/309 (33%)
7tm_1 54..317 CDD:278431 92/284 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.050

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