DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R1 and CCHa2-R

DIOPT Version :10

Sequence 1:NP_731790.1 Gene:PK2-R1 / 41639 FlyBaseID:FBgn0038140 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length:518 Identity:132/518 - (25%)
Similarity:217/518 - (41%) Gaps:115/518 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GTNASTMAADSP----VDESLTLRTALTVCYALIFVAGVLGNLITCIVISRNNFMHTATNFYLFN 148
            |.|||......|    :|...|.  .:||.|.|||:.|||||....|:..|:..|....|.|:.:
  Fly    48 GHNASADGGIVPYVPVLDRPETY--IVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILS 110

  Fly   149 LAVSDLILLVSGIPQELYNLWYPDMYPFTDAMCIMGSVLSEMAANATVLTITAFTVERYIAICHP 213
            ||::||::::..:|.... ::..:.:||...||.:.....:::...:|.|:||.:.|||.||.:|
  Fly   111 LALADLLVILVCVPVATI-VYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNP 174

  Fly   214 FRQHTMSKLSRAIKFIFA---IWLAAFLLALPQAMQFSVVYQNEGYSCT----------MENDFY 265
            .|     ||......:|.   ||:.|.||.:|..: ||.:.....::.|          ..:..|
  Fly   175 LR-----KLQTKPLTVFTAVMIWILAILLGMPSVL-FSDIKSYPVFTATGNMTIEVCSPFRDPEY 233

  Fly   266 AHVFAVSG--FIFFGGPMTAICVLYVLIGVKLKRSRLLQSLP--RRTFDANRGLNAQGRVIRMLV 326
            |. |.|:|  .:::..|::.|..||:::..:|..|  .:::|  :::..:.....|:..|.||:|
  Fly   234 AK-FMVAGKALVYYLLPLSIIGALYIMMAKRLHMS--ARNMPGEQQSMQSRTQARARLHVARMVV 295

  Fly   327 AVAVAFFLCWAPFHAQRLMAVYGLNLINIGISRDAFNDYFRILDYTSGVLYFLSTCINPLLYNIM 391
            |..|.||:|:.|:|      |:.|.......:.:.|::::.:|........||::|:||:....:
  Fly   296 AFVVVFFICFFPYH------VFELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCV 354

  Fly   392 SHKFREAFK-----ITLTRQFGLARNHHHQQSQHHQHNYSALLRQNGSMRLQPASCSVNNNALEP 451
            |..||:.|.     |.:.||..|           .||:.:..:..|.|:.....|..|...|   
  Fly   355 SGVFRQHFNRYLCCICVKRQPHL-----------RQHSTATGMMDNTSVMSMRRSTYVGGTA--- 405

  Fly   452 YGSYRVVQFRCRDANHQLSLQDSIRTTTTTTTINSNSMAAGNGVGGGAGGGGGGRRLRKQEL--- 513
             |:.|....  |::||.:.                   .||.|||||.|.|..|...|:..:   
  Fly   406 -GNLRASLH--RNSNHGVG-------------------GAGGGVGGGVGSGRVGSFHRQDSMPLQ 448

  Fly   514 ----YGPGPGTAVPHRMLQAQVSQLSSLGDANSLLEAEVVDRHYASGRAKRALLATKSGALLV 572
                :|.|.|            ...|.||               |.||. .|:...: |.|:|
  Fly   449 HGNAHGGGAG------------GGSSGLG---------------AGGRT-AAVSEKRXGTLIV 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R1NP_731790.1 7tmA_capaR 108..399 CDD:320262 84/307 (27%)
TM helix 1 108..135 CDD:320262 12/26 (46%)
TM helix 2 142..168 CDD:320262 7/25 (28%)
TM helix 3 181..211 CDD:320262 9/29 (31%)
TM helix 4 223..245 CDD:320262 7/24 (29%)
TM helix 5 265..294 CDD:320262 9/30 (30%)
TM helix 6 316..346 CDD:320262 12/29 (41%)
TM helix 7 367..392 CDD:320262 6/24 (25%)
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 84/309 (27%)
TM helix 1 71..97 CDD:320593 12/25 (48%)
TM helix 2 104..130 CDD:320593 7/26 (27%)
TM helix 3 142..172 CDD:320593 9/29 (31%)
TM helix 4 182..202 CDD:320593 6/19 (32%)
TM helix 5 234..259 CDD:320593 8/25 (32%)
TM helix 6 285..315 CDD:320593 14/35 (40%)
TM helix 7 330..355 CDD:320593 6/24 (25%)

Return to query results.
Submit another query.