DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R1 and mlnr

DIOPT Version :10

Sequence 1:NP_731790.1 Gene:PK2-R1 / 41639 FlyBaseID:FBgn0038140 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_002935793.1 Gene:mlnr / 100492328 XenbaseID:XB-GENE-940650 Length:364 Species:Xenopus tropicalis


Alignment Length:368 Identity:113/368 - (30%)
Similarity:179/368 - (48%) Gaps:67/368 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LTLRTALTVCYALIFVAGVLGNLITCIVISRNNFMHTATNFYLFNLAVSDLILLVSGIPQELYNL 168
            :|....:|:...::.|.||:||.||.::|.|...|.|.|||||.::|:||||:|:| :|.:||.|
 Frog    32 ITTLIPVTIVLLIVMVVGVIGNTITILIIRRYKEMRTTTNFYLSSMAMSDLIILLS-LPFDLYRL 95

  Fly   169 WYPDMYPFTDAMCIMGSVLSEMAANATVLTITAFTVERYIAICHPFRQHTMSKLSRAIKFIFAIW 233
            |....:.|...:|.....:||....:|:|.|||.::|||:|||.|.:...:...:|....|..:|
 Frog    96 WKSMPWIFGGFLCRFLHFISEGCTYSTILHITALSIERYLAICFPLKSKVLITKTRVKCVIVFLW 160

  Fly   234 LAAFLLALPQAMQFSVVYQNEGYSCTMEND--------FYA-HVFAVSGFI---------FFGGP 280
            :.|.|.|.|   .:.||...:.|:.|.::|        ||| |    ||.:         :|..|
 Frog   161 VFALLSAGP---FYFVVGIAQMYNITNDSDTGWECRYTFYAVH----SGLLNVMMWVTTTYFFIP 218

  Fly   281 MTAICVLYVLIGVKLKRSRLLQSLPRRTFDANRGLNAQGR------VIRMLVAVAVAFFLCWAPF 339
            |..:.:||..||.||.:|:          ::.||.|...|      .:|:|..|.:||.:||.||
 Frog   219 MFCLIILYGFIGKKLWKSQ----------NSIRGRNTAQRDKSHRQTMRILAVVVLAFIICWLPF 273

  Fly   340 HAQRLMAVYGLNLINI-GISRDAFNDYFRILDYTSGVLYFLSTCINPLLYNIMSHKFRE-AFKIT 402
            |..|::      ..|. |.....|:.||.::...   |::||..|||:|||::|.|:|. |:|:.
 Frog   274 HIGRIV------FANTEGYEMMKFSQYFNVVAIQ---LFYLSASINPILYNLISKKYRSAAYKLL 329

  Fly   403 LTRQFGLARNHHHQQSQHHQHNYSALLRQNGSMRLQPASCSVN 445
                         :.|...:..|:.:....|. :.:.::|..|
 Frog   330 -------------RPSTAKKKTYNTIKNDTGD-KTESSACVHN 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R1NP_731790.1 7tmA_capaR 108..399 CDD:320262 105/316 (33%)
TM helix 1 108..135 CDD:320262 9/26 (35%)
TM helix 2 142..168 CDD:320262 15/25 (60%)
TM helix 3 181..211 CDD:320262 12/29 (41%)
TM helix 4 223..245 CDD:320262 7/21 (33%)
TM helix 5 265..294 CDD:320262 12/38 (32%)
TM helix 6 316..346 CDD:320262 13/35 (37%)
TM helix 7 367..392 CDD:320262 9/24 (38%)
mlnrXP_002935793.1 7tmA_motilin_R 36..325 CDD:320260 105/315 (33%)
TM helix 1 36..63 CDD:320260 9/26 (35%)
TM helix 2 70..95 CDD:320260 15/25 (60%)
TM helix 3 108..138 CDD:320260 12/29 (41%)
TM helix 4 150..172 CDD:320260 7/24 (29%)
TM helix 5 203..232 CDD:320260 7/28 (25%)
TM helix 6 250..280 CDD:320260 11/35 (31%)
TM helix 7 293..318 CDD:320260 11/27 (41%)

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