DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R2 and gpr39

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_956711.2 Gene:gpr39 / 791773 ZFINID:ZDB-GENE-040426-1395 Length:440 Species:Danio rerio


Alignment Length:456 Identity:125/456 - (27%)
Similarity:200/456 - (43%) Gaps:81/456 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QGLEPEELLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLIT---CIVISRNNFMHTATNFYLFN 107
            |.|||.           ..|...|:|.|.||...|||||..|   ..|:.||.::..:...::.:
Zfish    11 QQLEPS-----------YGLKVFLTVLYCLILSLGVLGNSATIHVAQVLQRNGYLQRSVAEHMVS 64

  Fly   108 LAISDMILLCSGMPQDLYN-LWHPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICH 171
            ||.||:::|..|:|.:||: :|.|......|:.|.:.:.|.|..:.||:|.:...::|||:||||
Zfish    65 LACSDLLVLLIGLPVELYSAIWFPFLSRSGDAACRIYNFLFELCSYATILNVATLSLERYLAICH 129

  Fly   172 PFRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQF----------SVVMQGMGTSCTMKNDFFAH 226
            |||...: :..|..:.:.|.|:.:.|:|||..:..          ...:|.: |.||..:..:. 
Zfish   130 PFRYRAL-RGGRTRRLLLAAWLCSALVALPLLVATGTEGYVPAGRQTPVQNL-TFCTSLSQHWV- 191

  Fly   227 VFAVSGFLFFGGPMTAICVLYVLI--GVKLKRSRLLQAL-----PRRC-------YDVNRGISAQ 277
            ::..|.|..|        |||:|:  ||......::..|     |...       :...||.:::
Zfish   192 MYRTSIFTAF--------VLYLLVLAGVAFMCRAMILVLRAPMGPAEAGASGDHKHQSARGKASR 248

  Fly   278 TRVIRMLVAVAVAFFICWAPFHAQRLMAVYGSTSGI-ESQWFNDVFSI---LDYTSGVLYFLSTC 338
            .:.|..||.:..|.|:||.|...:|||     |:.: :|.|.....:.   |...:...::||:.
Zfish   249 KQTILFLVLIVCALFVCWMPNQIRRLM-----TAAVPKSSWTGSYLTSYIKLHPVADSFFYLSSV 308

  Fly   339 INPLLYNIMSHKFREAFKVTLARHFGLGGKNQGRGLPHTYSALRRNQT------GSL-RLHTTDS 396
            :||:|||:.|.:||.||..||.....|...|: |.|.::.::...|.|      .|| |:....|
Zfish   309 LNPMLYNLSSRQFRSAFLQTLLCRLSLQHANR-RTLENSGASKSSNNTLRPLLQRSLNRIRMATS 372

  Fly   397 VRTTMTSMATTTTGLNGSANGSGNGTTTGQSVRLNRVSLDSVQM----QGQNRSRQDLFDNPRRM 457
            .|:|..|.|.....||.:....|.|          :::||....    ||:.....|..:..|..
Zfish   373 SRSTPPSSAERRDSLNTTDRPQGEG----------KLTLDPQNTTNWPQGEGELTSDSQEKERNQ 427

  Fly   458 L 458
            |
Zfish   428 L 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 91/317 (29%)
TM helix 1 69..94 CDD:320262 12/27 (44%)
TM helix 2 101..127 CDD:320262 9/26 (35%)
TM helix 3 140..170 CDD:320262 10/29 (34%)
TM helix 4 182..204 CDD:320262 7/21 (33%)
TM helix 5 225..253 CDD:320262 8/29 (28%)
TM helix 6 275..305 CDD:320262 10/29 (34%)
TM helix 7 323..348 CDD:320262 8/27 (30%)
gpr39NP_956711.2 7tmA_GPR39 21..325 CDD:320263 91/319 (29%)
TM helix 1 21..48 CDD:320263 11/26 (42%)
TM helix 2 58..84 CDD:320263 9/25 (36%)
TM helix 3 98..128 CDD:320263 10/29 (34%)
TM helix 4 139..161 CDD:320263 7/21 (33%)
TM helix 5 190..219 CDD:320263 9/37 (24%)
TM helix 6 246..276 CDD:320263 11/34 (32%)
TM helix 7 293..318 CDD:320263 8/24 (33%)

Return to query results.
Submit another query.