DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and Gpr39

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001107864.1 Gene:Gpr39 / 288995 RGDID:1306745 Length:456 Species:Rattus norvegicus


Alignment Length:456 Identity:113/456 - (24%)
Similarity:204/456 - (44%) Gaps:75/456 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TLSVGYALIFIAGVLGNLIT---CIVISRNNFMHTATNFYLFNLAISDMILLCSGMPQDLYN-LW 128
            ||::.|.::|:.|:|||.:|   ..|:.:..::......::.:||.||:::...|||.:.|: :|
  Rat    32 TLTLVYLIVFVVGILGNSVTIRVTQVLQKKGYLQKEVTDHMISLACSDILVFLIGMPMEFYSIIW 96

  Fly   129 HPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFAIWI 193
            :|...|.....|.|.:.|.||.:.||:|.:...:.|||||||||||...:|...:....|..:|:
  Rat    97 NPLTTPSYALSCKLHTFLFETCSYATLLHVLTLSFERYIAICHPFRYKDVSGPCQVKLLIGFVWV 161

  Fly   194 AALLLALP----QAIQFSV--VMQGMGTSCTMKND-----------------------FFAHVF- 228
            .:.|:|||    ..|::.:  |....|.:|.:...                       |.:.:| 
  Rat   162 TSALVALPLLFAMGIEYPLANVPTHKGLNCNLSRTRHHDHPGDSNMSICTNLSSRWEVFQSSIFG 226

  Fly   229 AVSGFLFFGGPMTAICVLYVLIGVKLKRSRLLQALPR---RCYDVNRGISAQTRVIRMLVAVAVA 290
            |.:.:|.....:..:|...:.:.:|.||..|....|:   |..:.....:|:.:.|..|..:.|.
  Rat   227 AFAVYLVVLVSVAFMCWNMMKVLMKSKRGTLAGTGPQLQLRKSESEESRTARRQTIIFLRLIVVT 291

  Fly   291 FFICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILDYTSGVLYFLSTCINPLLYNIMSHKFREAF 355
            ..:||.|...:|:||...........:|.....:|.: |...::||:.:||||||:.|.:||:.|
  Rat   292 LAVCWMPNQIRRIMAAAKPKHDWTKSYFKAYMILLPF-SDTFFYLSSVVNPLLYNVSSQQFRKVF 355

  Fly   356 KVTLARHFGLGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVRTTMTSMATTTTGLNGSANGSGN 420
            ...|.....|...||.:.....:|:.:         :::.|.|:.:..:|:.      .:|.|  
  Rat   356 WQVLCCRLTLQHANQEKQQRAYFSSTK---------NSSRSARSPLIFLASR------RSNSS-- 403

  Fly   421 GTTTGQSVRLNRVSLDSVQ-----MQGQNRSRQDLFDNPRRMLQTQISQLSSVGDA--HSLLEED 478
                  |.|.|:|.|.:.|     ::|:::....  ::|    ||. |:....|.|  :||.|::
  Rat   404 ------SRRTNKVFLSTFQAEAKPLEGEHQPLSP--ESP----QTG-SETKPAGSATENSLQEQE 455

  Fly   479 L 479
            :
  Rat   456 V 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 85/322 (26%)
TM helix 1 69..94 CDD:320262 9/27 (33%)
TM helix 2 101..127 CDD:320262 8/26 (31%)
TM helix 3 140..170 CDD:320262 13/29 (45%)
TM helix 4 182..204 CDD:320262 6/25 (24%)
TM helix 5 225..253 CDD:320262 4/28 (14%)
TM helix 6 275..305 CDD:320262 8/29 (28%)
TM helix 7 323..348 CDD:320262 10/24 (42%)
Gpr39NP_001107864.1 7tmA_GPR39 31..355 CDD:320263 86/323 (27%)
TM helix 1 31..58 CDD:320263 9/25 (36%)
TM helix 2 68..94 CDD:320263 8/25 (32%)
TM helix 3 108..138 CDD:320263 13/29 (45%)
TM helix 4 150..172 CDD:320263 6/21 (29%)
TM helix 5 217..246 CDD:320263 5/28 (18%)
TM helix 6 276..306 CDD:320263 8/29 (28%)
TM helix 7 323..348 CDD:320263 10/25 (40%)

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