DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and nmur-2

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_493666.2 Gene:nmur-2 / 173398 WormBaseID:WBGene00019616 Length:403 Species:Caenorhabditis elegans


Alignment Length:387 Identity:125/387 - (32%)
Similarity:187/387 - (48%) Gaps:68/387 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDMILLC 117
            ::|||             :.|..||:.|:.||:.|||||:.|..||..||:|||:||:||:|.|.
 Worm    31 VIPTV-------------IIYGTIFLLGLFGNICTCIVIAANKSMHNPTNYYLFSLAVSDIIALI 82

  Fly   118 SGMPQDLY-NLWHPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTMSKL 181
            .|:|.:.| :|.:...|.||:.||...:.|.|..:.|:::.|..|:.||::|||||.|....|.|
 Worm    83 LGLPMEFYQSLDYSYPYRFSEGICKARAFLIEFTSYASIMIICCFSFERWLAICHPLRSKIFSTL 147

  Fly   182 SRAVKFIFAIWIAALLLALPQA--IQFSVV-------MQGMGTSCTMKNDFFAH----------- 226
            .||...|...|..:.:.|||.|  :|.:.:       .|......:....|..|           
 Worm   148 WRANVLIILAWTISFVCALPIAFIVQINKLPLPEDAKYQPWTNKVSTDGIFVLHTEFCAMNQSRP 212

  Fly   227 -------VFAVSGFLFFGGPMTAICVLYVLIGVKLKRSRL----LQALPRRCYDVNRGISAQTRV 280
                   :||.:  :||..|..||.::|..|.|:|:.|.:    .:.:.:|....||      .|
 Worm   213 DQQKMIIIFAFT--VFFVIPAIAIVIMYAHIAVQLESSEIDLKGDKMVKKRRNKSNR------TV 269

  Fly   281 IRMLVAVAVAFFICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILD----YTSGVLYFLSTCINP 341
            ::||::|.:.|||||.|||.|||::||  |:..|:...:.....|.    |.||..|:.::..||
 Worm   270 LKMLLSVVITFFICWLPFHIQRLLSVY--TTWSETTTISPPVQFLSMIVFYISGFCYYSNSAANP 332

  Fly   342 LLYNIMSHKFREAF-KVTLARHFG----LGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVR 398
            :||||:|.|:|.|| :..|..|..    .|.:..|:....:.|.....:|    |.|..|||
 Worm   333 ILYNILSQKYRSAFCRTILGDHIANFVFKGHQRPGQSKRCSSSTEAEQRT----LMTRGSVR 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 109/321 (34%)
TM helix 1 69..94 CDD:320262 11/24 (46%)
TM helix 2 101..127 CDD:320262 14/26 (54%)
TM helix 3 140..170 CDD:320262 9/29 (31%)
TM helix 4 182..204 CDD:320262 8/23 (35%)
TM helix 5 225..253 CDD:320262 10/45 (22%)
TM helix 6 275..305 CDD:320262 15/29 (52%)
TM helix 7 323..348 CDD:320262 11/28 (39%)
nmur-2NP_493666.2 7tmA_capaR 32..346 CDD:320262 112/336 (33%)
TM helix 1 32..59 CDD:320262 14/39 (36%)
TM helix 2 66..92 CDD:320262 14/25 (56%)
TM helix 3 106..136 CDD:320262 9/29 (31%)
TM helix 4 148..170 CDD:320262 7/21 (33%)
TM helix 5 215..244 CDD:320262 9/30 (30%)
TM helix 6 264..294 CDD:320262 17/35 (49%)
TM helix 7 314..339 CDD:320262 10/24 (42%)

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