DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and nmur-2

DIOPT Version :9

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_493666.2 Gene:nmur-2 / 173398 WormBaseID:WBGene00019616 Length:403 Species:Caenorhabditis elegans


Alignment Length:387 Identity:125/387 - (32%)
Similarity:187/387 - (48%) Gaps:68/387 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDMILLC 117
            ::|||             :.|..||:.|:.||:.|||||:.|..||..||:|||:||:||:|.|.
 Worm    31 VIPTV-------------IIYGTIFLLGLFGNICTCIVIAANKSMHNPTNYYLFSLAVSDIIALI 82

  Fly   118 SGMPQDLY-NLWHPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFRQHTMSKL 181
            .|:|.:.| :|.:...|.||:.||...:.|.|..:.|:::.|..|:.||::|||||.|....|.|
 Worm    83 LGLPMEFYQSLDYSYPYRFSEGICKARAFLIEFTSYASIMIICCFSFERWLAICHPLRSKIFSTL 147

  Fly   182 SRAVKFIFAIWIAALLLALPQA--IQFSVV-------MQGMGTSCTMKNDFFAH----------- 226
            .||...|...|..:.:.|||.|  :|.:.:       .|......:....|..|           
 Worm   148 WRANVLIILAWTISFVCALPIAFIVQINKLPLPEDAKYQPWTNKVSTDGIFVLHTEFCAMNQSRP 212

  Fly   227 -------VFAVSGFLFFGGPMTAICVLYVLIGVKLKRSRL----LQALPRRCYDVNRGISAQTRV 280
                   :||.:  :||..|..||.::|..|.|:|:.|.:    .:.:.:|....||      .|
 Worm   213 DQQKMIIIFAFT--VFFVIPAIAIVIMYAHIAVQLESSEIDLKGDKMVKKRRNKSNR------TV 269

  Fly   281 IRMLVAVAVAFFICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILD----YTSGVLYFLSTCINP 341
            ::||::|.:.|||||.|||.|||::||  |:..|:...:.....|.    |.||..|:.::..||
 Worm   270 LKMLLSVVITFFICWLPFHIQRLLSVY--TTWSETTTISPPVQFLSMIVFYISGFCYYSNSAANP 332

  Fly   342 LLYNIMSHKFREAF-KVTLARHFG----LGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVR 398
            :||||:|.|:|.|| :..|..|..    .|.:..|:....:.|.....:|    |.|..|||
 Worm   333 ILYNILSQKYRSAFCRTILGDHIANFVFKGHQRPGQSKRCSSSTEAEQRT----LMTRGSVR 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tm_1 83..344 CDD:278431 98/296 (33%)
nmur-2NP_493666.2 7tmA_capaR 32..346 CDD:320262 112/336 (33%)
TM helix 1 34..58 CDD:320262 13/36 (36%)
TM helix 2 67..89 CDD:320262 12/21 (57%)
TM helix 3 107..129 CDD:320262 5/21 (24%)
TM helix 4 152..168 CDD:320262 4/15 (27%)
TM helix 5 216..239 CDD:320262 7/24 (29%)
TM helix 6 267..292 CDD:320262 14/30 (47%)
TM helix 7 314..339 CDD:320262 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BGH7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 1 1.000 - - X673
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.910

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