DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and mlnr

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_003200046.1 Gene:mlnr / 100536406 ZFINID:ZDB-GENE-130530-1015 Length:345 Species:Danio rerio


Alignment Length:378 Identity:124/378 - (32%)
Similarity:176/378 - (46%) Gaps:71/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LLPTVT--PMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHTATNFYLFNLAISDMIL 115
            |.||.|  |:|.:.:         .:||.||.||.:|.::|.|...|.|.||.||.::||||:::
Zfish    10 LFPTSTLIPVTTICI---------FLFIIGVTGNTMTILIIQRFKDMKTTTNLYLSSMAISDLVI 65

  Fly   116 LCSGMPQDLYNLWHPDNYPFSDSICILESVLSETAANATVLTITAFTVERYIAICHPFR-QHTMS 179
            ..| :|.|||.||....:.|.:.:|.|...::|...|||:|.||..::|||:|||.||: :..::
Zfish    66 FLS-LPFDLYRLWKYVPWIFGEFVCRLSHYINEGCTNATILHITVLSMERYLAICFPFKAKAAIT 129

  Fly   180 KLSRAVKF-IFAIWIAALLLALPQAIQFSV-----VMQGMGT-SCTMKNDFFAHVFAVSGFL--- 234
            |  |.||: |.|:|..|||.|.|......|     .|...|: .|  |:..:|   ..||.|   
Zfish   130 K--RRVKYVILALWGFALLSAAPMFFLMGVEYENETMPDPGSRQC--KHTRYA---IESGLLHTT 187

  Fly   235 ------FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRC--YDVNRGISAQTRVIRMLVAVAVAF 291
                  :|..||..:..||..||.||.:||.....|...  ..|||      :.:::|..|...|
Zfish   188 IWVSTAYFFCPMFCLLFLYGSIGRKLWKSRHELHGPNAAARQKVNR------QTVKILAVVVSVF 246

  Fly   292 FICWAPFHAQRLMAVYGST--SGIESQWFNDVFSILDYTSGVLYFLSTCINPLLYNIMSHKFREA 354
            .|||.|:|..|.:..:...  |...||.||       ..|.||::||..:||:|||:||:|:|.|
Zfish   247 AICWLPYHIGRFLFTHVDDYHSARLSQNFN-------VASMVLFYLSASVNPVLYNLMSNKYRSA 304

  Fly   355 FKVTLARHFGLGGKNQGRGLPHTYSALRRNQTGSLRLHTTDSVRTTMTSMATT 407
            .|....             ||..|....|.     .:.|.|.:..|:..:..|
Zfish   305 VKRLFL-------------LPRGYQGTNRR-----HISTRDDITETLNGVKET 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 108/306 (35%)
TM helix 1 69..94 CDD:320262 8/24 (33%)
TM helix 2 101..127 CDD:320262 13/25 (52%)
TM helix 3 140..170 CDD:320262 13/29 (45%)
TM helix 4 182..204 CDD:320262 11/22 (50%)
TM helix 5 225..253 CDD:320262 11/36 (31%)
TM helix 6 275..305 CDD:320262 9/29 (31%)
TM helix 7 323..348 CDD:320262 10/24 (42%)
mlnrXP_003200046.1 7tmA_motilin_R 17..305 CDD:320260 110/317 (35%)
TM helix 1 17..44 CDD:320260 10/35 (29%)
TM helix 2 51..76 CDD:320260 13/25 (52%)
TM helix 3 89..119 CDD:320260 13/29 (45%)
TM helix 4 131..153 CDD:320260 11/21 (52%)
TM helix 5 183..212 CDD:320260 8/28 (29%)
TM helix 6 230..260 CDD:320260 12/35 (34%)
TM helix 7 273..298 CDD:320260 13/31 (42%)

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