DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK2-R2 and ghsr

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_002931618.1 Gene:ghsr / 100497774 XenbaseID:XB-GENE-484475 Length:359 Species:Xenopus tropicalis


Alignment Length:348 Identity:120/348 - (34%)
Similarity:175/348 - (50%) Gaps:40/348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NEKFLLNLTQVLNISADNLTSLLQGLEPEELLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLIT 87
            :|.::.|.|.....|::|.:      .||:  |..  :.|:.:|..::|...|:||.|:.||::|
 Frog     3 SEIYIQNRTMDYYYSSNNYS------WPED--PVF--LFPVPVLTGITVTCILLFIIGISGNVMT 57

  Fly    88 CIVISRNNFMHTATNFYLFNLAISD-MILLCSGMPQDLYNLWHPDNYPFSDSICILESVLSETAA 151
            .:|:|:...|.|.||.||.::|.|| :|.||  ||.|||.||....:.|..|:|.|...:||...
 Frog    58 MLVVSKYKDMRTTTNLYLSSMAFSDLLIFLC--MPLDLYRLWQYRPWNFGSSLCKLFQFVSECCT 120

  Fly   152 NATVLTITAFTVERYIAICHPFRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMGTS 216
            .:|:|.|||.:||||.|||.|.:...:....|....|..:|..:.:.|.|..:...|..:. ||:
 Frog   121 YSTILNITALSVERYFAICFPLKAKVVITKGRVKLVISVLWAVSFVSAGPIFVLVGVEHEN-GTN 184

  Fly   217 CTMKNDFFAHVFAV-SGFL---------FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVN 271
            ....|:..|..:|: ||.|         ||..|:..:.|||.|||.||.|.:.....|..  .:.
 Frog   185 PLDTNECKATEYAIKSGLLTIMVWTSSIFFFLPVFCLTVLYTLIGRKLWRRKRETIGPHT--SIR 247

  Fly   272 RGISAQTRVIRMLVAVAVAFFICWAPFHAQRLMAVYGSTSG-----IESQWFNDVFSILDYTSGV 331
            ...:.||  ::||..|..||.:||.|||..|.:......:|     :.||:.|.|       |.|
 Frog   248 DKHNKQT--VKMLAVVVFAFILCWLPFHVARYLFSKSFEAGSLEIALISQYCNLV-------SFV 303

  Fly   332 LYFLSTCINPLLYNIMSHKFREA 354
            |::||..|||:||||||.|:|.|
 Frog   304 LFYLSAAINPILYNIMSKKYRVA 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 110/302 (36%)
TM helix 1 69..94 CDD:320262 10/24 (42%)
TM helix 2 101..127 CDD:320262 15/26 (58%)
TM helix 3 140..170 CDD:320262 14/29 (48%)
TM helix 4 182..204 CDD:320262 5/21 (24%)
TM helix 5 225..253 CDD:320262 14/37 (38%)
TM helix 6 275..305 CDD:320262 13/29 (45%)
TM helix 7 323..348 CDD:320262 12/24 (50%)
ghsrXP_002931618.1 7tmA_GHSR 37..327 CDD:320259 110/304 (36%)
TM helix 1 37..64 CDD:320259 10/26 (38%)
TM helix 2 71..96 CDD:320259 15/26 (58%)
TM helix 3 109..139 CDD:320259 14/29 (48%)
TM helix 4 151..173 CDD:320259 5/21 (24%)
TM helix 5 202..231 CDD:320259 10/28 (36%)
TM helix 6 249..279 CDD:320259 13/31 (42%)
TM helix 7 295..320 CDD:320259 15/31 (48%)

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