DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK2-R2 and ghsrb

DIOPT Version :10

Sequence 1:NP_731788.1 Gene:PK2-R2 / 41638 FlyBaseID:FBgn0038139 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_002666717.1 Gene:ghsrb / 100332193 ZFINID:ZDB-GENE-090327-1 Length:365 Species:Danio rerio


Alignment Length:361 Identity:123/361 - (34%)
Similarity:177/361 - (49%) Gaps:43/361 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NISADNLTSLLQGLEPEELLPTVTPMTPLSLLATLSVGYALIFIAGVLGNLITCIVISRNNFMHT 99
            ||...|.||       |:..|  ..:.|:.:|..::|..:.:|:.|:.|||:|.:|:::...|.|
Zfish    20 NIMDSNATS-------EDEYP--VHLFPVPILTGITVTCSFLFLVGIAGNLLTILVVTKYKDMRT 75

  Fly   100 ATNFYLFNLAISD-MILLCSGMPQDLYNLWHPDNYPFSDSICILESVLSETAANATVLTITAFTV 163
            .||.||.::|:|| :|.||  ||.|||.:|....:.|.|.:|.|...:||:...:|:|.|||.:|
Zfish    76 TTNLYLCSMALSDLLIFLC--MPLDLYRVWRYRPWNFGDELCKLFQFVSESCTYSTILNITALSV 138

  Fly   164 ERYIAICHPFRQHTMSKLSRAVKFIFAIWIAALLLALPQAIQFSVVMQGMGTSCTMKNDFFAHVF 228
            |||.|||.|.|...:....|....|..:|..||..|.|..|...|..:. ||:....|:..|..:
Zfish   139 ERYFAICFPLRAKVIVTRGRVKGVILLLWTVALCSAGPIFILVGVEHEN-GTNAWETNECKATEY 202

  Fly   229 AV-SGFL---------FFGGPMTAICVLYVLIGVKLKRSRLLQALPRRCYDVNRGISAQTRVIRM 283
            |: ||.|         ||..|:..:.|||.|||.:|.|.:.....|....|     .:..:.::|
Zfish   203 AIRSGLLTMMVWVSSVFFFLPVLCLTVLYSLIGRRLWRRKENPVGPISSRD-----KSNKQTVKM 262

  Fly   284 LVAVAVAFFICWAPFHAQRLMAVYGSTSGIESQWFNDVFSILDYTSGVLYFLSTCINPLLYNIMS 348
            |..|.:||.:||.|||..|.:.  ..:|...|...:.:....:..|.||::||..|||:||||||
Zfish   263 LAVVVLAFVLCWLPFHVGRYLV--SKSSEANSPVISQISEYCNLVSFVLFYLSAAINPILYNIMS 325

  Fly   349 HKFREA----FKVTLARHFGLGGKNQGRGLPHTYSA 380
            .|||.|    |:|..|         .||.|....:|
Zfish   326 KKFRSAACKLFRVKRA---------PGRSLQSIVNA 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK2-R2NP_731788.1 7tmA_capaR 69..355 CDD:320262 107/300 (36%)
TM helix 1 69..94 CDD:320262 8/24 (33%)
TM helix 2 101..127 CDD:320262 15/26 (58%)
TM helix 3 140..170 CDD:320262 14/29 (48%)
TM helix 4 182..204 CDD:320262 7/21 (33%)
TM helix 5 225..253 CDD:320262 14/37 (38%)
TM helix 6 275..305 CDD:320262 11/29 (38%)
TM helix 7 323..348 CDD:320262 12/24 (50%)
ghsrbXP_002666717.1 7tm_GPCRs 43..332 CDD:475119 106/298 (36%)
TM helix 1 45..69 CDD:410628 8/23 (35%)
TM helix 2 78..99 CDD:410628 11/22 (50%)
TM helix 3 116..138 CDD:410628 8/21 (38%)
TM helix 4 161..177 CDD:410628 5/15 (33%)
TM helix 5 209..232 CDD:410628 6/22 (27%)
TM helix 6 260..282 CDD:410628 10/21 (48%)
TM helix 7 300..325 CDD:410628 12/24 (50%)

Return to query results.
Submit another query.