DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 2mit and PODN

DIOPT Version :10

Sequence 1:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_714914.3 Gene:PODN / 127435 HGNCID:23174 Length:613 Species:Homo sapiens


Alignment Length:508 Identity:138/508 - (27%)
Similarity:217/508 - (42%) Gaps:104/508 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DIPT-SSRLAAEREE-QQLSRQDVGRLSYQSIHRM--LRDENEPDSFRGELRYQQKRHKRELE-L 92
            |:|. ::.|:.:..: :::..:::.||     ||:  |..:|...:.|| |..:...|...|. |
Human    93 DLPEHTNHLSLQNNQLEKIYPEELSRL-----HRLETLNLQNNRLTSRG-LPEKAFEHLTNLNYL 151

  Fly    93 NAPANKLNLTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQ---LRQLDLGNNSL 154
            ....|||.|..|.|.             ..:.::|.::|.|..:....|.|   ||.:.|.||  
Human   152 YLANNKLTLAPRFLP-------------NALISVDFAANYLTKIYGLTFGQKPNLRSVYLHNN-- 201

  Fly   155 EVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQ-----LKNLNLAHNELLNISRESFY 214
                 .|||.  .||....:.|.|....|.:|.|.:.:|:     |..|:|.:|:|..|...:|.
Human   202 -----KLADA--GLPDNMFNGSSNVEVLILSSNFLRHVPKHLPPALYKLHLKNNKLEKIPPGAFS 259

  Fly   215 NLLELQTLVLSHNNISD--IDYETFLALPNLQYLDLSHNRLSGSAIRALQGIP-DLVSLSIAYNP 276
            .|..|:.|.|.:|.::|  :|.|||..|.:|:|||||.|.||    |...|:| .||.|.:..|.
Human   260 ELSSLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLS----RVPAGLPRSLVLLHLEKNA 320

  Fly   277 --------------------------DVGVAMQEFVASWSLKELDASGTGLCQVPAALAQSVRTL 315
                                      :.|:....|.....|..:......|.:||:.|.:.||||
Human   321 IRSVDANVLTPIRSLEYLLLHSNQLREQGIHPLAFQGLKRLHTVHLYNNALERVPSGLPRRVRTL 385

  Fly   316 KLSDNWLKAINCGDMDSYPLLQYLDLSHSRIA--QVEDDALGRLELLESLFLDRNLLMRVPSSLP 378
            .:..|.:..|...|..:...|:.|:||::||.  ||..||..:|.||.||.|..|.|..:|..||
Human   386 MILHNQITGIGREDFATTYFLEELNLSYNRITSPQVHRDAFRKLRLLRSLDLSGNRLHTLPPGLP 450

  Fly   379 ------------------------PSLEHLFLQHNQIME--LPPQAFVGLVNLQTLDLSNNRLIF 417
                                    ..|..|:|..|::..  |.|:|:|.|.:||.||::.|:|..
Human   451 RNVHVLKVKRNELAALARGALVGMAQLRELYLTSNRLRSRALGPRAWVDLAHLQLLDIAGNQLTE 515

  Fly   418 LPPLSLPKLLT-LNLESSGVESVSQSIVHTLPQLRDLLLEDNPIKCSDLLGIA 469
            :|. .||:.|. |.|:::.:.:|..:...:.|.|:.:.|..|.:....::..|
Human   516 IPE-GLPESLEYLYLQNNKISAVPANAFDSTPNLKGIFLRFNKLAVGSVVDSA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
2mitNP_001262529.1 LRR <106..458 CDD:443914 116/417 (28%)
leucine-rich repeat 124..143 CDD:275380 4/18 (22%)
leucine-rich repeat 144..167 CDD:275380 8/22 (36%)
leucine-rich repeat 172..194 CDD:275380 5/21 (24%)
leucine-rich repeat 195..218 CDD:275380 8/22 (36%)
leucine-rich repeat 219..242 CDD:275380 10/24 (42%)
leucine-rich repeat 243..311 CDD:275380 23/94 (24%)
leucine-rich repeat 312..335 CDD:275380 7/22 (32%)
leucine-rich repeat 336..359 CDD:275380 11/24 (46%)
leucine-rich repeat 360..380 CDD:275380 9/43 (21%)
leucine-rich repeat 381..404 CDD:275380 9/24 (38%)
leucine-rich repeat 405..449 CDD:275380 13/44 (30%)
PODNNP_714914.3 LRRNT 68..98 CDD:214470 2/4 (50%)
leucine-rich repeat 79..96 CDD:275380 1/2 (50%)
LRR 1 97..118 1/20 (5%)
leucine-rich repeat 100..121 CDD:275380 3/25 (12%)
LRR <107..372 CDD:443914 76/296 (26%)
LRR 2 121..141 6/20 (30%)
leucine-rich repeat 122..147 CDD:275380 6/25 (24%)
LRR 3 147..168 8/33 (24%)
leucine-rich repeat 148..192 CDD:275380 13/56 (23%)
LRR 4 169..189 4/19 (21%)
PLN00113 181..>588 CDD:215061 114/401 (28%)
LRR 5 192..212 10/28 (36%)
leucine-rich repeat 193..218 CDD:275380 11/33 (33%)
LRR 6 218..238 5/19 (26%)
leucine-rich repeat 219..239 CDD:275380 4/19 (21%)
LRR 7 239..260 7/20 (35%)
leucine-rich repeat 240..263 CDD:275380 8/22 (36%)
LRR 8 263..283 6/19 (32%)
leucine-rich repeat 264..289 CDD:275380 10/24 (42%)
LRR 9 289..310 12/24 (50%)
leucine-rich repeat 290..310 CDD:275380 12/23 (52%)
leucine-rich repeat 311..334 CDD:275380 4/22 (18%)
LRR 10 311..331 4/19 (21%)
LRR 11 334..357 2/22 (9%)
leucine-rich repeat 335..360 CDD:275380 2/24 (8%)
LRR 12 360..380 5/19 (26%)
LRR 13 381..402 7/20 (35%)
leucine-rich repeat 385..405 CDD:275380 4/19 (21%)
LRR 14 405..426 9/20 (45%)
leucine-rich repeat 406..476 CDD:275380 21/69 (30%)
LRR 15 431..452 10/20 (50%)
LRR 16 476..489 4/12 (33%)
leucine-rich repeat 477..502 CDD:275380 9/24 (38%)
LRR 17 502..522 8/20 (40%)
leucine-rich repeat 503..523 CDD:275380 9/20 (45%)
LRR 18 523..544 4/20 (20%)
leucine-rich repeat 524..547 CDD:275380 4/22 (18%)
LRR 19 547..568 4/21 (19%)
leucine-rich repeat 548..571 CDD:275380 4/20 (20%)
LRR 20 573..595
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..613
Blue background indicates that the domain is not in the aligned region.

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