| Sequence 1: | NP_001262529.1 | Gene: | 2mit / 41616 | FlyBaseID: | FBgn0260793 | Length: | 1155 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002938986.1 | Gene: | lrrc4c / 100188921 | XenbaseID: | XB-GENE-5772259 | Length: | 639 | Species: | Xenopus tropicalis |
| Alignment Length: | 742 | Identity: | 173/742 - (23%) |
|---|---|---|---|
| Similarity: | 270/742 - (36%) | Gaps: | 201/742 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 176 SC-NKFSQ-ISTSFFAQRLP-----QLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDID 233
Fly 234 YETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASG 298
Fly 299 TGLCQVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVEDDALGRLELLESL 363
Fly 364 FLDRNLLMRVPSSLPPS-------LEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPPL 421
Fly 422 SLPKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDNPIKCS-DLLGIAEWASPCRSVDAGQSNG 485
Fly 486 ASVSGRVDLKTEYLQ--FHNFYENFSSRECGIRKPEND---TKPPSCSL-TRASATLT----TTP 540
Fly 541 RSMSKVEKSQEAQATATSVEVAAATAATSEKTG----IQATSAAQSTAAATTAEREAIATATSSD 601
Fly 602 TTATPTLAAAAAIQSAGNIPAQLTTKTLRPTETTSLAQLQRRQQMPGMPAKTTETPAKNLPSL-- 664
Fly 665 AQTKATTALPILATRDAATATTEINSDKPTNISGATKTVATSAAEIATPPAIEVPQTILAGKKSD 729
Fly 730 KMPADKAHETLLKYPTRDTSGQVATTPHKHATLQLHVKDRHLIGTPLLMHKGDVLLVDAEQLLLP 794
Fly 795 GTATVADADSEVLDPSQQHQSAEQEKHQSATDKRQADAINGDTKSPAKGHKKKPSLSIKKMTYST 859
Fly 860 KHAAKTVEDMAATSKTPQHQHSSVNTP 886 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 2mit | NP_001262529.1 | LRR_RI | 124..355 | CDD:238064 | 51/185 (28%) |
| leucine-rich repeat | 124..143 | CDD:275380 | |||
| leucine-rich repeat | 144..167 | CDD:275380 | |||
| leucine-rich repeat | 172..194 | CDD:275380 | 8/24 (33%) | ||
| LRR_8 | 193..253 | CDD:290566 | 23/64 (36%) | ||
| leucine-rich repeat | 195..218 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 219..242 | CDD:275380 | 9/22 (41%) | ||
| LRR_8 | 241..301 | CDD:290566 | 17/59 (29%) | ||
| leucine-rich repeat | 243..311 | CDD:275380 | 17/67 (25%) | ||
| leucine-rich repeat | 312..335 | CDD:275380 | 4/22 (18%) | ||
| LRR_8 | 334..415 | CDD:290566 | 26/87 (30%) | ||
| leucine-rich repeat | 336..359 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 360..380 | CDD:275380 | 7/19 (37%) | ||
| LRR_8 | 379..460 | CDD:290566 | 20/87 (23%) | ||
| LRR_4 | 379..>415 | CDD:289563 | 13/42 (31%) | ||
| leucine-rich repeat | 381..404 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 405..449 | CDD:275380 | 8/43 (19%) | ||
| lrrc4c | XP_002938986.1 | LRRNT | 47..78 | CDD:214470 | 8/25 (32%) |
| LRR | <77..302 | CDD:227223 | 71/271 (26%) | ||
| leucine-rich repeat | 78..101 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 102..125 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 126..149 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 150..173 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 174..198 | CDD:275380 | 8/43 (19%) | ||
| leucine-rich repeat | 199..220 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 221..244 | CDD:275380 | 8/26 (31%) | ||
| leucine-rich repeat | 245..268 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 269..290 | CDD:275380 | 7/41 (17%) | ||
| LRRCT | 301..351 | CDD:214507 | 14/51 (27%) | ||
| Ig | 354..443 | CDD:416386 | 24/98 (24%) | ||
| Ig strand A | 354..357 | CDD:409353 | 0/5 (0%) | ||
| Ig strand A' | 361..364 | CDD:409353 | 1/2 (50%) | ||
| Ig strand B | 370..377 | CDD:409353 | 1/6 (17%) | ||
| Ig strand C | 383..388 | CDD:409353 | 0/4 (0%) | ||
| Ig strand C' | 391..393 | CDD:409353 | 0/1 (0%) | ||
| Ig strand D | 402..406 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 409..413 | CDD:409353 | 0/3 (0%) | ||
| Ig strand F | 423..430 | CDD:409353 | 1/6 (17%) | ||
| Ig strand G | 433..443 | CDD:409353 | 4/16 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||