DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11668 and svh-1

DIOPT Version :10

Sequence 1:NP_650254.1 Gene:CG11668 / 41606 FlyBaseID:FBgn0038113 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:260 Identity:67/260 - (25%)
Similarity:114/260 - (43%) Gaps:45/260 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 LVGGRLTQENEHPYMCALGWPSRTNRWIHEHGSSKRRYTFNCGCAMIAPRFAITAAHCASVGGES 212
            :|||..|.....|:..||              .:|.....:||.:::.....||||||.......
 Worm   713 VVGGFETVPGAFPWTAAL--------------RNKATKAHHCGASILDKTHLITAAHCFEEDERV 763

  Fly   213 PSVALIGGVELNS---GRGQLIEIKRISQHPHFDAETLTNDLAVVKLA------RRSHMPVACLW 268
            .|..::.|...|:   |..|:..::||..:|.: .:..::|:|::::.      .....|: ||.
 Worm   764 SSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPI-CLP 826

  Fly   269 NQESL--PERPLTALGYGQ--TKFAGPHSSNLLQIMLYHLNFQQCQRYLHNYDKLANGLGSGQMC 329
            :::.:  |.|.....|:|.  .::|....:.|:.|    :|...|.    |..::.:.:.....|
 Worm   827 SKDFVYTPGRQCVVSGWGSMGLRYAERLQAALIPI----INRFDCV----NSSQIYSSMSRSAFC 883

  Fly   330 AGDYSGNMDTCQGDSGGPLLLHQHMRHHRHTIPYVV-GITSFGGACA-SGQPGVYVRIAHYIQWI 392
            ||...|.:|:||||||||...      .|....:|: |:.|:|..|| ..|||:|..:|.|:.||
 Worm   884 AGYLEGGIDSCQGDSGGPFAC------RREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

  Fly   393  392
             Worm   943  942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11668NP_650254.1 Tryp_SPc 149..395 CDD:238113 67/259 (26%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 67/260 (26%)
Blue background indicates that the domain is not in the aligned region.

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