DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11600 and CG6753

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_650219.2 Gene:CG6753 / 41557 FlyBaseID:FBgn0038070 Length:405 Species:Drosophila melanogaster


Alignment Length:382 Identity:129/382 - (33%)
Similarity:208/382 - (54%) Gaps:37/382 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IDKYGYSVETHTVRTGDGYILDMFRIPS-SPNCKEDGFKPSVLIQHGLISLADSFLVTGPRSGLP 110
            |...||:||.|:|.|.|||:|.:.|||. .|.......:|.|.:..||.:.:|.:|:.|....|.
  Fly    39 IQNDGYNVERHSVTTKDGYVLTLHRIPQVDPELGSLLRRPVVFLLSGLYASSDVWLLNGREDSLA 103

  Fly   111 FMLADRCYDVWLSNSRGVRYSQRHIRLKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALHF 175
            ::|....|||||.|:||..|.::::....::..||.|||||||:.||||.:||:|.||.::|:||
  Fly   104 YLLWRAGYDVWLGNNRGNIYCRKNMWRNTTEREFWDFSWHEMGVYDLPAQVDYVLRTTGQKAMHF 168

  Fly   176 VCHSQGCTTLLVLLSMKPEYNRMIKTANMMAPAVFMKHARNKLMKMFG------NIIMSMKDSSF 234
            |..|||.|..|||.||.|:||.:.|:|.::||..::.:.::.|.|:.|      |.:..|.:.  
  Fly   169 VGISQGGTVFLVLNSMMPQYNAVFKSATLLAPVAYVSNTKSGLAKVIGPVLGTRNYVSKMLEG-- 231

  Fly   235 FGPLDAIRFLLSVFCKCSKFKKLCAFMFILASEEP--------------TSYMNNTAIPLILATH 285
                      :.:|.....|||..: |..|.:|:|              |.::|.|.:|.::|..
  Fly   232 ----------VEMFSTNKFFKKFLS-MTCLENEKPLVCISRLWPAVGYDTRFLNKTLLPDLMANF 285

  Fly   286 PGAISTRQPKHFLQLRKSGKFRPYDFGVMRNKKLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLV 350
            |...|.:|..|:.|...|.:||.||:|..||...|.|..||:|.||||  .:|:.::.|..|.:|
  Fly   286 PAGGSVKQLMHYFQGYVSTRFRQYDYGPERNWLHYQQLEPPEYALENV--STPVTVFFSENDYIV 348

  Fly   351 ARKDIHILISKLDKA-VLHDVVFEKWSHSDFLFAKLIKKVVNEPIIKVIDHFENRQQ 406
            |..||..|:::|... .::.|.:::|:|.||:....:::.:.:.|:..::.:|.|::
  Fly   349 APADIWRLLTRLPNVEAVYKVPWKRWNHFDFICGLGVREYIFDNIVLSMNRYEQRRR 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 127/370 (34%)
CG6753NP_650219.2 PLN02872 39..394 CDD:215470 126/369 (34%)

Return to query results.
Submit another query.