DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11600 and Lipk

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001192278.1 Gene:Lipk / 240633 MGIID:2679259 Length:403 Species:Mus musculus


Alignment Length:409 Identity:125/409 - (30%)
Similarity:208/409 - (50%) Gaps:34/409 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WLL------IVSGMPKVKFGLQNFTGRGKDYRIKVITGILIIDKYGYSVETHTVRTGDGYILDMF 70
            |||      ::|| |...:..::.|....:..|..:....:|..:||..|.|.|.|.|||||..:
Mouse     3 WLLATTCCVLLSG-PIDGYKQESITNPEANMNIVCVFQSELISYWGYPYEKHDVITEDGYILGTY 66

  Fly    71 RIPSSPNC-KEDGFKPSVLIQHGLISLADSFLVTGPRSGLPFMLADRCYDVWLSNSRGVRYSQRH 134
            |||....| ::...|..|.:|||||:.|::::...|.:.|.|:|||..|||||.||||..:|:.|
Mouse    67 RIPHGKGCSRKTAPKAVVYLQHGLIASANNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRNH 131

  Fly   135 IRLKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALHFVCHSQGCTTLLVLLSMKPEYNRMI 199
            :||......:|.|||.||...||||.::.||..:.::.|.:|.||||.|...:..|..||..:.|
Mouse   132 LRLSPKSPQYWAFSWDEMAKYDLPATVNLILEKSGQKQLFYVGHSQGTTIAFIAFSTNPELAKKI 196

  Fly   200 KTANMMAPAVFMKHARNKLMK-----------MFGNIIMSMKDSSFFGPLDAIRFLLSVFCKCSK 253
            :....:||...:|:.|:.:.|           :||:.:.|  ..::|.     :|:.:..|....
Mouse   197 RLFFALAPVATVKYTRSPMKKLTTLSRKAVKVLFGDKMFS--THTWFE-----QFIATKVCNRKL 254

  Fly   254 FKKLCA-FMFILASEEPTSYMNNTAIPLILATHPGAISTRQPKHFLQLRKSGKFRPYDFG-VMRN 316
            |.:||: |:|.|:..:|.: :|.:.:.:.|:..|...|.:...|:.|...||:.:.:|:| ..:|
Mouse   255 FHQLCSNFLFSLSGFDPQN-LNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQN 318

  Fly   317 KKLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLVA-RKDIHILISKLDKAVLHDVVFEKWSHSDF 380
            ...:||.|||.|.:..:|..:.:   .|.|.|:|| .||...|:.|:...:.:..: ..::|.||
Mouse   319 MMHFNQLTPPVYNISKMRVPTAM---WSGGQDVVADAKDTKNLLPKIANLIYYKEI-PHYNHMDF 379

  Fly   381 LFAKLIKKVVNEPIIKVID 399
            ...:...:.|...:|::|:
Mouse   380 YLGQDAPQEVYGDLIRMIE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 115/364 (32%)
LipkNP_001192278.1 PLN02872 40..395 CDD:215470 115/366 (31%)

Return to query results.
Submit another query.