DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11598 and lipf

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_998569.1 Gene:lipf / 406713 ZFINID:ZDB-GENE-040426-2737 Length:396 Species:Danio rerio


Alignment Length:360 Identity:118/360 - (32%)
Similarity:177/360 - (49%) Gaps:7/360 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SEIIASHNYPVEVHTVLTRDGYLLDAFRIPGSKFCQQSGPKPAVLFQHGMSASSDVFLLNGPQDS 86
            ||||....||.|...|:|.|||:|...|||.....:....||.|..|||:.|:...::.|.|.:|
Zfish    37 SEIIRHWGYPAEEFEVVTEDGYILSINRIPHGVKNKNEEVKPVVFLQHGLLAAGSNWVTNLPNNS 101

  Fly    87 LAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTEDVAAFIDYILDTTKQRAL 151
            |.|:||||.||||:.||||..:|.:||||||..:.:|:||..|:..:|:.|.|::|...|.|..:
Zfish   102 LGFVLADAGFDVWIGNSRGNTWSCKHVSLDPRQKEYWKFSHDEMAKKDLPAVINFITKMTGQEQI 166

  Fly   152 HFLGHSQGCTTLVVLLSMRPEYNKLVKTAVLLAP--AVFMRHTSTLSQTVFRSFIM--AMPDKEF 212
            .::|||||.|...:..|..||....:|....|||  .|.|..:.....:|...|::  ....|:|
Zfish   167 FYVGHSQGTTIAFMAFSTMPELASKIKMFFALAPVATVGMTKSPMTKLSVIPEFLIWDLFGQKDF 231

  Fly   213 MYHNGVLNKLLSNVCGLFVARVFCTTFFLISNGKISKHLNTSVIPLIAATLPAGVSSRQPKHFIQ 277
            ...|.::....:..|......|.|...|.:..|...|:||.|..|:..|..|||.|.:...|:.|
Zfish   232 FPQNELIKFFATEFCSRKPLSVLCGNVFFLLCGFDEKNLNMSRTPVYTAHCPAGTSVQNMIHWAQ 296

  Fly   278 LTDSGKFRPFDFGILRNLINYKSLEPPDYTLSNVRPLTPVHIFYSDDDSSTAKEDIQNFAARVPE 342
            ...|.|...:|:|...|:.:|....||.|.:.::  :.|..::....|:....:|:.....::|:
Zfish   297 AVKSSKLMAYDYGRAGNMAHYNQSTPPLYNIQDM--MVPTAVWSGGQDTLADPKDVALLLTQIPK 359

  Fly   343 VVMHRISTPGWHHTDFVHSMTVADVINKPVIEIFR 377
            :|..| ....|.|.||:..|.....:.:.:|||.|
Zfish   360 LVYKR-DIKHWEHLDFIWGMDAPQEMYEKMIEIMR 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 118/360 (33%)
lipfNP_998569.1 PLN02872 4..393 CDD:215470 117/358 (33%)

Return to query results.
Submit another query.