DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11598 and Lipo1

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_006231364.1 Gene:Lipo1 / 294097 RGDID:1565682 Length:397 Species:Rattus norvegicus


Alignment Length:384 Identity:117/384 - (30%)
Similarity:197/384 - (51%) Gaps:19/384 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FCLYIDLAKG----LITSEIIASHNYPVEVHTVLTRDGYLLDAFRIP-GSKFCQQSGPKPAVLFQ 68
            ||| ::..|.    :..||||...|||...:.|:|.|||:|...||| |......|.||..|..|
  Rat    18 FCL-LEPNKNPESHMNVSEIIKYWNYPSLEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQ 81

  Fly    69 HGMSASSDVFLLNGPQDSLAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTE 133
            ||:.::..|::.|.|.:||||:||:|.:||||.||||:.::::||:|.|..|.||.||:.::...
  Rat    82 HGLFSTPGVWVANPPDNSLAFILAEAGYDVWLGNSRGSTWAKKHVTLSPDSEEFWAFSFDQMIAY 146

  Fly   134 DVAAFIDYILDTTKQRALHFLGHSQGCTTLVVL--LSMRPEYNKLVKTAVLLAPAVFMRHTSTLS 196
            |:.|.|::||:||.|..::::|||.|  ||:.|  .|...|..:.:|..:|:||...:::.....
  Rat   147 DLPATINFILNTTGQEQIYYIGHSLG--TLIALGAFSTNQELAEKIKLNILIAPVRTVKYVKGFG 209

  Fly   197 QTVF----RSFIMAMPDKEFMYHNGVLNKLLSNVCGLFVARVFCTTFFLISNGKISKHLNTSVIP 257
            :.:.    .:|.:....|||: ...|.::....||.:.:....|........|.....||||.|.
  Rat   210 RLLAYFSPEAFKLVFGKKEFL-PTVVFSEYSKYVCNIKLVDAGCAGVLGSLTGFSEDQLNTSRID 273

  Fly   258 LIAATLPAGVSSRQPKHFIQLTDSGKFRPFDFGI-LRNLINYKSLEPPDYTLSNVRPLTPVHIFY 321
            :......||.|::...|..|...||:|:.:|:|. ..|:.:|....||.|::.|::  .|..:|.
  Rat   274 VYITHSLAGTSTQILIHAGQAIRSGEFQAYDWGSPSLNMQHYNQTTPPLYSVENMK--VPTVMFT 336

  Fly   322 SDDDSSTAKEDIQNFAARVPEVVMHRISTPGWHHTDFVHSMTVADVINKPVIEIFRSFE 380
            ...|.....:|:.|...::..::.|: :.|.:.|.||:..:.....::..::.|...::
  Rat   337 GLKDFLADPKDVANLVPKIFNLIYHK-TIPEFSHLDFIVGLNAKTEVSDEILTILGEYD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 113/367 (31%)
Lipo1XP_006231364.1 PLN02872 34..387 CDD:215470 112/358 (31%)

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