DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11598 and lipl-3

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_503233.1 Gene:lipl-3 / 178572 WormBaseID:WBGene00020016 Length:404 Species:Caenorhabditis elegans


Alignment Length:373 Identity:117/373 - (31%)
Similarity:187/373 - (50%) Gaps:20/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LITSEIIASHNYPVEVHTVLTRDGYLLDAFRIPGSK--FCQQSGPKPAVLFQHGMSASSDVFLLN 81
            :.|.:||....||..:::|.|.|||:|:..|||..|  ....:|.:|.|..|||:..:|..:.:|
 Worm    28 MTTPQIIERWGYPAMIYSVTTDDGYILELHRIPHGKTNVTWPNGKQPVVFMQHGLLCASTDWTMN 92

  Fly    82 GPQDSLAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTEDVAAFIDYILDTT 146
            .|:.|.||:.|||.|||||.|.||..||.:|.:|..|...||.:||.|:.|.|:.|.||.:|:.|
 Worm    93 LPEQSAAFIFADAGFDVWLGNMRGNTYSMKHKNLKASHSDFWEWSWDEMATYDLPAMIDKVLEVT 157

  Fly   147 KQRALHFLGHSQGCTTLVVLLSMRPE-YNKLVKTAVLLAPA----------VFMRHTSTLSQTVF 200
            .|.:|:::|||||..|:...||.... :.|.:|....|||.          .|..|..:|.   |
 Worm   158 GQESLYYMGHSQGTLTMFSHLSKDDGIFAKKIKKFFALAPVGSVKDIKGFLSFFAHYFSLE---F 219

  Fly   201 RSFIMAMPDKEFMYHNGVLNKLLSNVC-GLFVARVFCTTFFLISNGKISKHLNTSVIPLIAATLP 264
            ..:.......||:.:|..:.....::| ||.:....|.....:..|..|...|::.:|:.|:..|
 Worm   220 DGWFDVFGAGEFLPNNWAMKLAAKDICGGLKIESDLCDNVCFLIAGPESDQWNSTRVPVYASHDP 284

  Fly   265 AGVSSRQPKHFIQLTDSGKFRPFDFGILRNLINYKSLEPPDYTLSNVRPLTPVHIFYSDDDSSTA 329
            ||.:::...|:||:...|....:|:|...|...|....||:|..:.::. |.:::::||.|....
 Worm   285 AGTATQNIVHWIQMVRHGGVPAYDWGSKENKKKYGQANPPEYDFTAIKG-TQIYLYWSDADWLAD 348

  Fly   330 KEDIQNF-AARV-PEVVMHRISTPGWHHTDFVHSMTVADVINKPVIEI 375
            |.||.|: ..|: |.::........::|.|||..:...:.|..|:::|
 Worm   349 KTDITNYLLTRLNPAIIAQNNYFTDYNHFDFVFGLRAPNDIYLPIVDI 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 116/370 (31%)
lipl-3NP_503233.1 PLN02872 10..390 CDD:215470 114/365 (31%)

Return to query results.
Submit another query.