Protein Alignment Vha55 and Atp6v1b1

DIOPT Version :10

• Sequence 1: NP_476908.1
• Gene: Vha55 / 41550
• FlyBaseID: FBgn0005671
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_001101337.2
• Gene: Atp6v1b1 / 312488
• RGDID: 1310619
• Length: 513
• Species: Rattus norvegicus
• Alignment Length: 479
• Identity: 415/479 - (86%)
• Similarity: 444/479 - (92%)
• Gaps: 1/479 - (0%)

  Fly     8 REHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSGSK 72
            ||||..|:|::|:.||:||:||..||||||:||:|||.::||||...|.|||.||||||||:|:|
  Rat    23 REHVQVVTRNYITHPRVTYRTVCSVNGPLVVLDQVKFAQYAEIVNFTLPDGTQRSGQVLEVAGTK 87

  Fly    73 AVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPI 137
            |:|||||||||||::.|.|||||||||||||||||||:||||||||||||.::|||||||.||||
  Rat    88 AIVQVFEGTSGIDSQKTTCEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPAVMAEDFLDINGQPI 152

  Fly   138 NPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDD 202
            ||..|||||||||||||.|||||||||||||||||||||||||||||||||||||| ..|:|||.
  Rat   153 NPHDRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK-KSKAVLDY 216

  Fly   203 HTDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAY 267
            |.|||||||||||||||||||||.|||:||:|.|||||||||||||||||||||||||.||||||
  Rat   217 HEDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAY 281

  Fly   268 QCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIP 332
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
  Rat   282 QCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIP 346

  Fly   333 ILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSD 397
            ||||||||||||||||||:||||||||||||||||:|||:|||||||||||||||||||||||.|
  Rat   347 ILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQVYPPINVLPSLSRLMKSAIGEGMTRKDHGD 411

  Fly   398 VSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIGWQ 462
            ||||||||||||||||||||||||||||.:||||||||.|||||||:||.|||||||||||:||:
  Rat   412 VSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRTVFESLDLGWK 476

  Fly   463 LLRIFPKEMLKRIPASILAEFYPR 486
            ||||||||||||||.|:..|||.|
  Rat   477 LLRIFPKEMLKRIPQSVTDEFYSR 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha55	NP_476908.1	V-ATPase_V1_B	25..488	CDD:273410	406/462 (88%)
Atp6v1b1	NP_001101337.2	V-ATPase_V1_B	40..504	CDD:273410	406/462 (88%)