Protein Alignment Vha55 and vma2

DIOPT Version :10

• Sequence 1: NP_476908.1
• Gene: Vha55 / 41550
• FlyBaseID: FBgn0005671
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_594623.1
• Gene: vma2 / 2543408
• PomBaseID: SPAC637.05C
• Length: 503
• Species: Schizosaccharomyces pombe
• Alignment Length: 478
• Identity: 372/478 - (77%)
• Similarity: 419/478 - (87%)
• Gaps: 0/478 - (0%)

  Fly    13 AVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSGSKAVVQV 77
            |..:|:..:|||:|.||:.:.|||||||.::.|::.|||.|.|.||:|||||||||:|.||:|||
pombe    11 AAVKDYSIKPRLSYNTVNSITGPLVILDNIRRPQYNEIVNLNLPDGSVRSGQVLEVAGHKAIVQV 75

  Fly    78 FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSR 142
            ||||||:|.:.|..:|||..:|.|||||||||||||||.||||||.:||||:|||.|.||||::|
pombe    76 FEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPIDKGPNLLAEDYLDINGSPINPYAR 140

  Fly   143 IYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF 207
            ||||||||||||:||.:||||||||||||||||||||||||||||||||||.|.|.|.|.|.|||
pombe   141 IYPEEMIQTGISSIDGLNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPTKDVHDGHEDNF 205

  Fly   208 AIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKH 272
            :|||||||||:||||||::|||||||.|.|.|||||||||||||||||||||:|:||||||.|||
pombe   206 SIVFAAMGVNLETARFFQRDFEENGSFERVTLFLNLANDPTIERIITPRLALSASEFLAYQTEKH 270

  Fly   273 VLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMP 337
            ||.|||||:|||:|||||||||||||||||:||||||||:|||||||||||||||||||||||||
pombe   271 VLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMP 335

  Fly   338 NDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVSNQL 402
            ||||||||||||||||||||:|||||||..||||:||||||||||||||||||||.||.||||||
pombe   336 NDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSAIGEGMTRNDHGDVSNQL 400

  Fly   403 YACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIGWQLLRIF 467
            ||.||||:|..:||:|||||||:.:|.|.||||.||||.|||||.|||||:||:||:.|.|||||
pombe   401 YAMYAIGRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFISQGAYENRTIFETLDLAWSLLRIF 465

  Fly   468 PKEMLKRIPASILAEFYPRDSRH 490
            |:|||.|||..||.::|.|.|.:
pombe   466 PREMLTRIPKKILDQYYSRSSAY 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha55	NP_476908.1	V-ATPase_V1_B	25..488	CDD:273410	366/462 (79%)
vma2	NP_594623.1	V-ATPase_V1_B	23..488	CDD:273410	367/464 (79%)