DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Psma8

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001157081.1 Gene:Psma8 / 73677 MGIID:1920927 Length:250 Species:Mus musculus


Alignment Length:229 Identity:95/229 - (41%)
Similarity:143/229 - (62%) Gaps:11/229 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIY 69
            ||..::|.|||.|.|.|:|||..||..|:.:|||..:|.||:..|.|..:.|.::.:|.::..:.
Mouse     4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALD 68

  Fly    70 NHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
            :|:.|.::|:..|.|:::.:||...|::.||.::|:.|..:.:.:|||.|:||||.|.||||:|.
Mouse    69 DHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISA 133

  Fly   135 LICGWDNDR-PYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDD--AVHTAILTLK 196
            ||.|:|:|. |.|||:||||.|.||||.|:|::|...:.||||.|:||...:|  |:..||..|.
Mouse   134 LIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALL 198

  Fly   197 EGFE--GKMTADNIEIGICDQNGFQRLDPASIKD 228
            |..:  ||    |||:.|..::  |.|...|.|:
Mouse   199 EVVQSGGK----NIELAIIRRD--QPLKMFSAKE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 94/228 (41%)
Psma8NP_001157081.1 proteasome_alpha_type_7 5..213 CDD:239724 89/211 (42%)

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