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Protein Alignment Prosalpha2 and Prosbeta3

DIOPT Version :9

Sequence 1:	NP_524328.1	Gene:	Prosalpha2 / 41531	FlyBaseID:	FBgn0086134	Length:	234	Species:	Drosophila melanogaster
Sequence 2:	NP_649858.1	Gene:	Prosbeta3 / 41079	FlyBaseID:	FBgn0026380	Length:	205	Species:	Drosophila melanogaster

Alignment Length:	200	Identity:	41/200 - (20%)
Similarity:	70/200 - (35%)	Gaps:	49/200 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 ALAAVSGGAPSVGIIASNG---VVIATENKHKSPLYEQHSVHRVEMIYNHIG----MVYSGMGPD 82
            ::.|.:||.    ::|..|   |.|||:  |:..:..|......:.:: |||    :..:|:..|
  Fly     2 SILAYNGGC----VVAMRGKDCVAIATD--HRFGIQAQTISTDFKKVF-HIGPRMFLGLTGLQTD 59

  Fly    83 YRLLVKQARKIAQTYYLTYKE----PIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWD--N 141
            . |.|:......:..|.|.:.    |.|.|       .:|..:.......|:.:..::.|.|  .
  Fly    60 I-LTVRDRLMFRKNLYETRENREMCPKPFS-------AMMSSFLYEHRFGPYFIEPVVAGLDPKT 116

  Fly   142 DRPYLYQSDPSGAYFAWKATAMGKNA----VNGKTFLEKRY-------SEDLELDDAVHTAILTL 195
            ..|::...|..|.          .||    |...|..|:.|       ..|||.|........::
  Fly   117 MEPFICNMDLIGC----------PNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSI 171

  Fly   196 KEGFE 200
            ...|:
  Fly   172 VNAFD 176

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha2	NP_524328.1	proteasome_alpha_type_2	6..231	CDD:239719	41/199 (21%)
Prosbeta3	NP_649858.1	proteasome_beta_type_3	6..201	CDD:239728	40/195 (21%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.