DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and psma2b

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001122146.1 Gene:psma2b / 403015 ZFINID:ZDB-GENE-060503-941 Length:234 Species:Danio rerio


Alignment Length:233 Identity:184/233 - (78%)
Similarity:209/233 - (89%) Gaps:0/233 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65
            ||...||||||||||||||||:|||||||:.|||||||.||||||:|||.|.||.||::.|||:|
Zfish     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKV 65

  Fly    66 EMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPF 130
            |.|..||||||||||||||:||::|||:||.|:|.|:||||..|||||||::|||||||||||||
Zfish    66 EPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPF 130

  Fly   131 GVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTL 195
            ||||||.|||.|||||:|||||||||||||||||||.|||||||||||:|||||:||:|||||||
Zfish   131 GVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTL 195

  Fly   196 KEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLASI 233
            ||.|||:||.||||:|||::.||:||.||.:|||||:|
Zfish   196 KESFEGQMTEDNIEVGICNEAGFRRLSPAEVKDYLAAI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 179/224 (80%)
psma2bNP_001122146.1 proteasome_alpha_type_2 6..231 CDD:239719 179/224 (80%)

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