DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha2 and Prosbeta2R1

DIOPT Version :10

Sequence 1:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster


Alignment Length:202 Identity:43/202 - (21%)
Similarity:81/202 - (40%) Gaps:15/202 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AVSGGAPSVGIIASNGVVIATENK-HKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQAR 91
            |:..|...||||..:||::..:.: .:.|:....:..::..:.:||....:|...|..::.....
  Fly    44 AIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTS 108

  Fly    92 KIAQTYYLTYKEPIPV---SQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSG 153
            .....:.|..:..:||   |.:::|.....|.:        .|.:|::.|.|...|.||...|.|
  Fly   109 AELDLHRLNTERRVPVVCASMMLRRTLFRYQGH--------IGAALVMGGVDTTGPQLYCIYPCG 165

  Fly   154 AYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKEG-FEGKMTADNIEIGICDQNG 217
            :.......|||...:...:.||..:..||:|:.........:..| |....:..||::.:....|
  Fly   166 SNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVITAKG 230

  Fly   218 --FQRLD 222
              :.|.|
  Fly   231 AVYLRTD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 43/202 (21%)
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 39/194 (20%)
Pr_beta_C 240..274 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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