Protein Alignment DNAlig3 and ATLIG4

DIOPT Version :10

• Sequence 1: NP_650187.2
• Gene: DNAlig3 / 41518
• FlyBaseID: FBgn0286075
• Length: 806
• Species: Drosophila melanogaster
• Sequence 2: NP_568851.2
• Gene: ATLIG4 / 835822
• AraportID: AT5G57160
• Length: 1219
• Species: Arabidopsis thaliana
• Alignment Length: 714
• Identity: 180/714 - (25%)
• Similarity: 292/714 - (40%)
• Gaps: 164/714 - (22%)

  Fly   143 LYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILDAFGPD 207
            |.::|:.::|..|.......|:|.:|..|..|....:::..||::..||::....:.|...|.||
plant   125 LTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKSIFQEFHPD 189

  Fly   208 AYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQVMTPISPMLASPCKSVEDAFKK 272
            |...:..:.||..:.|:...:..::            ....|:|...:.|.||.....|..|:||
plant   190 AEDLFNVTCDLKLVCEKLRDRHQRH------------KRQDIEVGKAVRPQLAMRIGDVNAAWKK 242

  Fly   273 -SPTGLYSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK--IRALKKYIPQAFPGGGEMILDSE 334
             ....:.:|.|:||:|:||||.|.|..:||||.   :||.  ..|:...|.|... ..:.|||.|
plant   243 LHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNF---LDHSEYAHAMSDLIVQNIL-VDKCILDGE 303

  Fly   335 IILVDTDTGALLPFGSLGAHKKQTFANAA---------VCLFVFDCILYDGE-DLTQLPFRKRRE 389
            :::.||.......|||     .|..|.||         :|...|| :||.|: .:.....::|.|
plant   304 MLVWDTSLNRFAEFGS-----NQEIAKAAREGLDSHKQLCYVAFD-VLYVGDTSVIHQSLKERHE 362

  Fly   390 ILEQNIQPIKSHVQL----------------SESEFLKTTRELAAMTARVLHANLEGVVLKSPTS 438
            :|::.::|:|..:::                |.|..:....::.......:....||:|||...|
plant   363 LLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGIVLKDLES 427

  Fly   439 TYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLMGCYD-----AFGRL 496
            .::||.|:  |:|:|.:|:..|  || .|::::|.:||||::||.::.||:...|     .:.|.
plant   428 KWEPGDRSGKWMKLKPEYIRAG--AD-LDVLIIGGYYGSGRRGGEVAQFLVALADRAEANVYPRR 489

  Fly   497 WKTVTKVHSGL-DDATNAEVHKSLIKLTERADAN---AIPSWLLC---SKSLVPDVLAKDPMKMP 554
            :.:..:|.:|| ||..|..|.|  :|...|.:.:   |.||:...   ||.. |||....|.|..
plant   490 FMSFCRVGTGLSDDELNTVVSK--LKPYFRKNEHPKKAPPSFYQVTNHSKER-PDVWIDSPEKSI 551

  Fly   555 VWEITGAEFTKSDAHT------ASGISVRFPRITRRRSDKSAKEANDLAHLEDLFEASKSNVNVD 613
            :..||      ||..|      .:..|:|||||.:.|.||...|..|:....:|..:|
plant   552 ILSIT------SDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELVNSS------- 603

  Fly   614 LLLANCSKDETAMNNKTTPEKEKKLNGNQSNGSKKLKRSNTGSDDEDGAPVLSKRKESKAIRSLS 678
                          |.|| :|:|:....|.|  .|:.:|             |||.|.|.: ||.
plant   604 --------------NGTT-QKQKESESTQDN--PKVNKS-------------SKRGEKKNV-SLV 637

  Fly   679 PSQKGLKDFFKPSKEFKSVVKKEPKEDEGNIESTSSKPQLFEGLVAHFAMEKDSSKL---MQQFS 740
            |||     |.                 :.::.....|..:|..::.:|.....|..|   .:...
plant   638 PSQ-----FI-----------------QTDVSDIKGKTSIFSNMIFYFVNVPRSHSLETFHKMVV 680

  Fly   741 QHGGCCTTEPQKADLVFYANTNEA----LDLEKLRTLYRRSCRHLNV---SWLQSCLDTQSRQP 797
            ::||           .|..|.|.:    :..|.....|:.:.|..:|   ||:..|.......|
plant   681 ENGG-----------KFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNKMLP 733

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DNAlig3	NP_650187.2	dnl1	88..604	CDD:273147	141/509 (28%)
ATLIG4	NP_568851.2	dnl1	61..600	CDD:273147	140/508 (28%)
		BRCT_DNA_ligase_IV_rpt1	655..741	CDD:349354	17/90 (19%)
		BRCT_DNA_ligase_IV_rpt2	802..898	CDD:349349
		PTZ00121	<909..>1180	CDD:173412