DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34402 and cdcp2

DIOPT Version :9

Sequence 1:NP_001097756.1 Gene:CG34402 / 41513 FlyBaseID:FBgn0085431 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_001096265.1 Gene:cdcp2 / 100124830 XenbaseID:XB-GENE-979982 Length:536 Species:Xenopus tropicalis


Alignment Length:475 Identity:96/475 - (20%)
Similarity:156/475 - (32%) Gaps:149/475 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 LSGEEANMGQGYFHSPQFPAHYPAHIKCAYKFIGRPDTHVEILFEELQLPPVVSGGCQLDALTLF 267
            ||..|.|:.     ||.||..||||.:|.:..:....:.:::.|....|.  ....|:.|.:.::
 Frog    33 LSAPEGNLS-----SPNFPGLYPAHTECCWLIVVSEGSTIQLQFHHFNLE--YHEDCEYDYVKVY 90

  Fly   268 DAESAHMNSVIDVICSSRPTRRLVSTGPDLLLEFNASSNRTAKGFRGKYKFVSNDLGVPNASVPP 332
            :..|....:::...|.:....:|.|:...|.:.|::..:..:.||...|:               
 Frog    91 NGASKDEGNLLGKFCGTSLPPQLTSSWHVLTVIFHSDKHVGSSGFYATYR--------------- 140

  Fly   333 PAVLEAASVVVKQEKLQQEQASAAKENSLMSDVELSKPGRSFEQCKQTFDSRVNKSGIFDSNQLL 397
                                                                             
 Frog   141 ----------------------------------------------------------------- 140

  Fly   398 LAKHALGGVVIGGSRVL-------------QCRYEFEAQAPERVQIRFHDFNVPTEHENSTGCQP 449
              |...||::.|.|.|:             :|.:...|.....|::.|.||.:..|     ||. 
 Frog   141 --KDICGGILTGLSGVITSPDYPDNYPNNAECNWLIRAAPGSTVRLTFTDFQMENE-----GCN- 197

  Fly   450 GDALHVVTELRGRYETQ-ELLCGAFLPKPLMSSGQQLHLQFVGKYPPTMTNKVQYYGFRAEYRFL 513
            .|.: .|.:..|..|.| ...||...|..:.||..:|.:.|...:      .:...||:|.|   
 Frog   198 FDYV-AVFDGSGAEENQVRYFCGTTKPPDIKSSFSELLVVFKSDF------NIGGRGFKAYY--- 252

  Fly   514 TNFGIMSGIQKEGCSFVYNSSERISGLFHSPNFPGYYLENVVCNYYFYGASDERVVLHFTYFDIE 578
                 .||    .|...:.|   :.|...||.:|..|..|:.|::..:..:..|:.:.|...::|
 Frog   253 -----YSG----ECQDTFTS---VKGNITSPRYPDTYPNNINCHWNIHLPAGFRIKIFFRDLELE 305

  Fly   579 GIGS----CDHQTASDYI---EFSNFMSTDRKFSRYCGK-LPDFEMRSDGRFFRVTLHSNDRFVA 635
            ...|    ||:...|.|.   |.|..:      .|:||: :|...|.|..:...|.  |.||..|
 Frog   306 ERSSLTDGCDYDHLSVYDGEGEHSPLL------GRWCGREIPPSVMSSKNKLLLVL--STDRDTA 362

  Fly   636 I-GFRALYTFETVSVNNSIT 654
            . ||...| ...|.:|.|.|
 Frog   363 SKGFVVSY-IGVVPINVSCT 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34402NP_001097756.1 CUB 195..318 CDD:238001 26/114 (23%)
CUB <414..512 CDD:238001 25/111 (23%)
CUB 527..644 CDD:238001 33/125 (26%)
cdcp2NP_001096265.1 CUB 29..140 CDD:238001 25/113 (22%)
CUB 144..254 CDD:238001 30/130 (23%)
CUB 257..370 CDD:238001 32/123 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.