DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and SETD1A

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_055527.1 Gene:SETD1A / 9739 HGNCID:29010 Length:1707 Species:Homo sapiens


Alignment Length:428 Identity:97/428 - (22%)
Similarity:156/428 - (36%) Gaps:124/428 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 AKITTELEKQLEALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAG-SRSQREPQKIGERALKS 341
            |..::..::.|||    ..:.|||.:..:|..||       |.|..| ...:.|.::..|.:..|
Human  1326 ALFSSPADEVLEA----PEVVVAEAEEPKPQQLQ-------QQREEGEEEGEEEGEEEEEESSDS 1379

  Fly   342 MQIKRAQ-FVRRKQLADLALFEKRMNHVEKPSPPIRVEN---------------NIDLDTIDSNF 390
            ......: .:||:.|...|  .:|......|.||.|...               |..||:.|.::
Human  1380 SSSSDGEGALRRRSLRSHA--RRRRPPPPPPPPPPRAYEPRSEFEQMTILYDIWNSGLDSEDMSY 1442

  Fly   391 M---------------------YIHDNIIGKDVPK----PEAGIVGCKCTEDTEECTASTKCCAR 430
            :                     ::|..|.....||    |:.|        ..|..|.|    ||
Human  1443 LRLTYERLLQQTSGADWLNDTHWVHHTITNLTTPKRKRRPQDG--------PREHQTGS----AR 1495

  Fly   431 FAGEL-FAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSG----- 489
            ..|.. .:.:...:.|.:.|.||    ......|:..:||::...|.....|......|.     
Human  1496 SEGYYPISKKEKDKYLDVCPVSA----RQLEGVDTQGTNRVLSERRSEQRRLLSAIGTSAIMDSD 1556

  Fly   490 -----------------------WGVRAATALRKGEFVCEYIGEIITSDEANERGKAY--DDNGR 529
                                   ||:.|...:...|.|.||:|:.|....|:.|.|.|  :..|.
Human  1557 LLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGS 1621

  Fly   530 TYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLRPIK 593
            :|||.:|::|      .|||...||::.||||.|.||     |:.:.:.: :...:|.::.:||.
Human  1622 SYLFRVDHDT------IIDATKCGNLARFINHCCTPN-----CYAKVITIESQKKIVIYSKQPIG 1675

  Fly   594 AGEELSFDYIRADNEDVPYENLSTAVRVECRCGADNCR 631
            ..||:::||      ..|.|:    .::.|.||.::||
Human  1676 VDEEITYDY------KFPLED----NKIPCLCGTESCR 1703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 68/301 (23%)
SETD1ANP_055527.1 Interaction with WDR82. /evidence=ECO:0000269|PubMed:37030068 60..89
RRM_Set1A 92..186 CDD:409964
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..308
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..363
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..486
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..655
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..854
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 891..1251
PRK12323 <1070..>1130 CDD:481241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1264..1293
HCFC1-binding motif (HBM) 1299..1303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1307..1417 25/103 (24%)
Interaction with CFP1 1415..1450 4/34 (12%)
N-SET 1425..1562 CDD:463344 26/152 (17%)
Interaction with ASH2L, RBBP5 and WDR5. /evidence=ECO:0000269|PubMed:17998332 1450..1537 19/102 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1472..1499 9/38 (24%)
WDR5 interaction motif (WIN). /evidence=ECO:0000269|PubMed:22266653, ECO:0000269|PubMed:22665483 1492..1497 3/8 (38%)
RxxxRR motif. /evidence=ECO:0000250|UniProtKB:P38827 1537..1542 1/4 (25%)
SET_SETD1 1556..1703 CDD:380946 44/167 (26%)
Blue background indicates that the domain is not in the aligned region.

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