DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(var)3-9 and AT5G47160

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_199527.1 Gene:AT5G47160 / 834762 AraportID:AT5G47160 Length:415 Species:Arabidopsis thaliana


Alignment Length:448 Identity:84/448 - (18%)
Similarity:159/448 - (35%) Gaps:149/448 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EAQIG------VNRNLQKQDLSNL------DVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVV 57
            |:.||      :..||..::.||.      |..:....|.:.|.::|..|:.. |::.:||....
plant    30 ESDIGGDDVATIKENLDGKEDSNCVGVAYRDHHRPKEESFDSIMKKAGFNVAN-GNLGNGKFPPS 93

  Fly    58 KAISGVQTVRFKNELERNITI----KLERLS-EKKIKNLLTSKQ---------------QRQQYE 102
            |               ||:.:    |::.|| |:.||.:....|               |:.:|.
plant    94 K---------------RNVPLPCEGKVQPLSVEEGIKLMAYESQRRRCFGKPLVSTKVVQKHRYS 143

  Fly   103 IKQRSMLRHLAELRRHSRFRRLCTKP---ASSSMPASTSSVDRRTT------RRSTSQTSLSPSN 158
            ..::.:....|...|||..::|....   |::..|  |...|.|.:      :|:.....|:|..
plant   144 PAKKKLSNATALRVRHSPMKKLSNASRLRANAHRP--TQHKDERRSGVLSVIQRNRLSKDLTPRQ 206

  Fly   159 SSGYGSVFGCEEHDVDKIPSLNGFAKLKRRRSSCVGAPTPNSKRSKNNMGVIAKRPPKGEYVVER 223
                      :..:|.:|.:| .|.:|.|.:::..|    .|:.:|:                 |
plant   207 ----------KVQEVLRIFTL-VFDELDRNKAARRG----GSETAKS-----------------R 239

  Fly   224 IECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTELEKQL 288
            |:      ||               ||..|      .||...|...:::..:...|:..::  |.
plant   240 ID------YQ---------------TWTIL------REMGMQVNSQKRIGSVPGIKVGDKI--QF 275

  Fly   289 EALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALK----------SMQ 343
            :|       .::.:..:..:...||.:.......|.|....|....|:|.:.          :|:
plant   276 KA-------ALSVIGLHFGIMSGIDYMYKGNKEVATSIVSSEGNDYGDRFINDVMIYCGQGGNMR 333

  Fly   344 IKRAQFVRRKQL--ADLALFEKRMNHVEKPSP--PIRVENNIDLDTIDSNFMYIHDNI 397
            .|..:.::.::|  .:|||    .|.:::.:|  .||.|..:|....|    |::|.:
plant   334 SKDHKAIKDQKLVGGNLAL----ANSIKEKTPVRVIRGERRLDNRGKD----YVYDGL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362 15/78 (19%)
Chromo 219..268 CDD:459793 10/48 (21%)
SET_SUV39H 388..634 CDD:380940 2/10 (20%)
AT5G47160NP_199527.1 SAD_SRA 260..407 CDD:460476 25/141 (18%)

Return to query results.
Submit another query.