DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and NSD2

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001427822.1 Gene:NSD2 / 7468 HGNCID:12766 Length:1398 Species:Homo sapiens


Alignment Length:659 Identity:143/659 - (21%)
Similarity:210/659 - (31%) Gaps:224/659 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LSEKKIKNLLTSKQQRQQYEIKQRSMLRHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTRR 147
            :|.||.:..:|:|::             ::.:|........||..|...:...:...:.||...|
Human   686 VSSKKSERGVTAKKE-------------YVCQLCEKPGSLLLCEGPCCGAFHLACLGLSRRPEGR 737

  Fly   148 STSQTSLSPSNSSGYGSVFGCEEHDVD-------------------KIP----SLNGFAKLKRRR 189
            .|....     :||..|.|.|:|...|                   |.|    ...||   :...
Human   738 FTCSEC-----ASGIHSCFVCKESKTDVKRCVVTQCGKFYHEACVKKYPLTVFESRGF---RCPL 794

  Fly   190 SSCVGAPTPNSKRSKNNMGVIAKRPPKGEYVVERIECVEMDQYQPVFFVKWLGYHDSENTWESLA 254
            .|||.....|...         .||.||    :.:.||..    ||      .||..:   ..||
Human   795 HSCVSCHASNPSN---------PRPSKG----KMMRCVRC----PV------AYHSGD---ACLA 833

  Fly   255 NVADCAEMEK--------FVERHQQLYEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNLQ 311
              |.|:.:..        |..|..:.:..::......:..:..:|...|:...    |:.|..|.
Human   834 --AGCSVIASNSIICTAHFTARKGKRHHAHVNVSWCFVCSKGGSLLCCESCPA----AFHPDCLN 892

  Fly   312 IDL-----------------------ILLAQYR----------AAGSRSQREPQKIGE------- 336
            |::                       :.|..||          ......|:...:|||       
Human   893 IEMPDGSWFCNDCRAGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFG 957

  Fly   337 ----------RALKSMQIKRAQ-----------FVRRKQLADLALFE-------KRMNHVEKPSP 373
                      |....|:..|..           |....|.|:....|       :.....|:..|
Human   958 SKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFREIKLQREARETQESERKPP 1022

  Fly   374 P---IRVE---NNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKC-TEDTEECTASTKCCARF 431
            |   |:|.   ..:.:.|.|.:           ::||       |.| ..|...|...::|..|.
Human  1023 PYKHIKVNKPYGKVQIYTADIS-----------EIPK-------CNCKPTDENPCGFDSECLNRM 1069

  Fly   432 AGELFAYERSTRRLRLRPGSAIYECNSR-CSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAA 495
                                .::||:.: |.....|.|:.... ||.|.......:|.|||:.|.
Human  1070 --------------------LMFECHPQVCPAGEFCQNQCFTK-RQYPETKIIKTDGKGWGLVAK 1113

  Fly   496 TALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQDSEYTIDAANYGNISHFIN 560
            ..:||||||.||:||:|..:|...|.|...:|..|:.:.|..    |.:..|||...||.|.|:|
Human  1114 RDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTI----DKDRIIDAGPKGNYSRFMN 1174

  Fly   561 HSCDPNLAVFPCWIEH--LNVALPHLVFFTLRPIKAGEELSFDYIRADNEDVPYENLSTA--VRV 621
            |||.||..... |..:  ..|.|     |.:..|.||.||:|:|           ||...  .:.
Human  1175 HSCQPNCETLK-WTVNGDTRVGL-----FAVCDIPAGTELTFNY-----------NLDCLGNEKT 1222

  Fly   622 ECRCGADNC 630
            .|||||.||
Human  1223 VCRCGASNC 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793 11/56 (20%)
SET_SUV39H 388..634 CDD:380940 72/249 (29%)
NSD2NP_001427822.1 None
Blue background indicates that the domain is not in the aligned region.

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