DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and setd1ba

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001038599.2 Gene:setd1ba / 567970 ZFINID:ZDB-GENE-050309-289 Length:1844 Species:Danio rerio


Alignment Length:500 Identity:109/500 - (21%)
Similarity:180/500 - (36%) Gaps:152/500 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 TPNSK---RSKNNMGVIAKRPPKGEYVVERIECVEM------DQYQPVFFVKWLGYHDSENTWES 252
            ||:.|   ||||..|:.....|:    |..||...:      :||..:         .||:..|.
Zfish  1434 TPSKKKLVRSKNKKGIQDSEEPQ----VTLIEASSLPELPVNNQYPDL---------PSESIKEE 1485

  Fly   253 LANVADCAEMEKFVERHQQLYEIYIAKITTELEKQLEALPLMENITVAEVDAY--EPLNLQIDLI 315
            ....|       |.|:.:       :::.|.:.|            |.|...|  ||:       
Zfish  1486 DGEPA-------FSEKEE-------SQVPTIIPK------------VEETSFYVEEPI------- 1517

  Fly   316 LLAQYRAAGSRSQREPQKIGERALKSMQI-----KRAQFVRRKQLADLALFEKRMNHVEKPSPPI 375
                      :..|..::..:..|.||..     :|..|:.|....::.:.....|         
Zfish  1518 ----------QKTRRQRRGWQELLLSMHSPVASPRRPSFMPRSDFEEMTILYDIWN--------- 1563

  Fly   376 RVENNIDLDTI-------------DSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTASTKC 427
               :.||.:.|             |:...:::|.:.....|.......|.|.....:........
Zfish  1564 ---DGIDEEDIRYLKITYDKMLQQDNAHDWLNDTLWVHHPPTNMGSATGVKKKRKEDGIRDHVTG 1625

  Fly   428 CARFAG-------ELFAYERSTR-------------------RLRLRPGSAIYECNSRCSCDSSC 466
            |||..|       :...|..|:|                   ::..|.||.......|.....||
Zfish  1626 CARSEGYYKIDKKDKMKYLNSSRLQSEEPDVDTQGKSIPAQPQVSTRAGSERRSEQRRLLSSFSC 1690

  Fly   467 SNRLVQHGR---QVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDN- 527
            .:.|::..:   :...:.|..::...||:.|...:...|.|.||:|:.|....|:.|.|.|:|. 
Zfish  1691 DSDLLKFNQLKFRKKKIRFCRSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEG 1755

  Fly   528 -GRTYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLR 590
             |.:|:|.:|::|      .|||...||.:.||||||:||     |:.:.:.| :...:|.::.:
Zfish  1756 IGSSYMFRVDHDT------IIDATKCGNFARFINHSCNPN-----CYAKVITVESQKKIVIYSRQ 1809

  Fly   591 PIKAGEELSFDY-IRADNEDVPYENLSTAVRVECRCGADNCRKVL 634
            ||...||:::|| ...::|.:|           |.|||:|||..|
Zfish  1810 PINVNEEITYDYKFPIEDEKIP-----------CLCGAENCRGTL 1843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793 10/54 (19%)
SET_SUV39H 388..634 CDD:380940 69/278 (25%)
setd1baNP_001038599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..58
RRM_Set1B 136..228 CDD:409965
PABP-1234 <145..333 CDD:130689
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..562
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..871
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..1108
PHA03247 <1136..1500 CDD:223021 20/92 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1160..1341
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1367..1499 20/91 (22%)
N-SET 1556..1699 CDD:463344 23/154 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1647..1678 4/30 (13%)
RxxxRR motif. /evidence=ECO:0000250|UniProtKB:P38827 1678..1683 0/4 (0%)
SET_SETD1 1693..1840 CDD:380946 50/168 (30%)
Blue background indicates that the domain is not in the aligned region.

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