DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and suv39h1b

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001119954.1 Gene:suv39h1b / 326906 ZFINID:ZDB-GENE-030131-5105 Length:421 Species:Danio rerio


Alignment Length:420 Identity:159/420 - (37%)
Similarity:212/420 - (50%) Gaps:82/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 QPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTELEKQLEALPLMENI 297
            |.::.|||.||.:|.||||...|:.....:.:|                                
Zfish    67 QELYLVKWKGYPESRNTWEPRRNLRCVNLLSQF-------------------------------- 99

  Fly   298 TVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVRRKQLAD-LALF 361
                   :|.||.::               ||:.::...|.|....:  ....:|.:|.. |..:
Zfish   100 -------WEDLNAEM---------------QRQNKRSAPRRLDPATV--THLTQRAKLRQTLKQW 140

  Fly   362 EKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTAS-- 424
            |..:|.:......|.|.|.:||:....:|.||:|..:|..:...|.. |||:||    :|.||  
Zfish   141 ETHLNSLGTHKGYISVRNQVDLEGPPKSFTYINDYKVGDGILLNEVS-VGCECT----DCLASPV 200

  Fly   425 TKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSG 489
            ..|||..:...||| ....::|:|||..|||||.||.|...||||:||.|.:..|.:|:|.||.|
Zfish   201 EGCCAGASQHKFAY-NELGQVRIRPGLPIYECNKRCRCGPDCSNRVVQRGIRYSLCIFRTDNGRG 264

  Fly   490 WGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQDSEYTIDAANYGN 554
            ||||....:||..||.||:|||||::||..||..||..|.||||||||   .|.|||:|||:|||
Zfish   265 WGVRTMERIRKNTFVMEYVGEIITTEEAERRGHVYDKEGATYLFDLDY---VDDEYTVDAAHYGN 326

  Fly   555 ISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDY-IRADNEDVPYENLST- 617
            ||||:||||||||.|:..:|::|:..||.:.||..|.|||||||:||| ::.|..|.....:.| 
Zfish   327 ISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRGIKAGEELTFDYNMKIDPVDAESTKMDTN 391

  Fly   618 ------------AVRVECRCGADNCRKVLF 635
                        .:||||:||...|||.||
Zfish   392 FGVMGLPGSPKKRMRVECKCGVATCRKYLF 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793 13/34 (38%)
SET_SUV39H 388..634 CDD:380940 127/261 (49%)
suv39h1bNP_001119954.1 CD_SUV39H1_like 45..99 CDD:349289 12/31 (39%)
SET 167..421 CDD:394802 127/262 (48%)
Blue background indicates that the domain is not in the aligned region.

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