DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and G9a

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster


Alignment Length:357 Identity:105/357 - (29%)
Similarity:152/357 - (42%) Gaps:104/357 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 EVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVRRKQLADLALFEKRM 365
            ::.::.||.|:..::      .|.:.:.||.:.|             |.||.    :||:.|.. 
  Fly  1342 QMRSFRPLGLRTFVV------CADASNGREARPI-------------QVVRN----ELAMSENE- 1382

  Fly   366 NHVEKPSPPIRVENNIDLDTIDS----NFMY-----IHDNIIGKDVPKPEAGIVGC--KCTEDTE 419
                              |..||    :|.|     |..|.:..|....:..|..|  .|:.|..
  Fly  1383 ------------------DEADSLMWPDFRYVTQCIIQQNSVQIDRRVSQMRICSCLDSCSSDRC 1429

  Fly   420 EC---------TASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDS-SCSNRLVQHG 474
            :|         ||.::..|.     |.||         ..:.|:|||..|.|:. ||.||:||:|
  Fly  1430 QCNGASSQNWYTAESRLNAD-----FNYE---------DPAVIFECNDVCGCNQLSCKNRVVQNG 1480

  Fly   475 RQVPLVLFKTAN-GSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYN 538
            .:.||.:.:..: ..||||||...:.||.||..|.|||:|:.||:.|   .||   :|.|||   
  Fly  1481 TRTPLQIVECEDQAKGWGVRALANVPKGTFVGSYTGEILTAMEADRR---TDD---SYYFDL--- 1536

  Fly   539 TAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDY- 602
               |:.:.|||..|||::.|.||||:||:.....:.||.:...|.:.||:.|.|.||||:.||| 
  Fly  1537 ---DNGHCIDANYYGNVTRFFNHSCEPNVLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYG 1598

  Fly   603 ---IRADNEDVPYENLSTAVRVECRCGADNCR 631
               .|.::...          |.|||....|:
  Fly  1599 EKFWRVEHRSC----------VGCRCLTTTCK 1620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 90/270 (33%)
G9aNP_001259088.1 PTZ00121 <68..>188 CDD:173412
EHMT_ZBD 786..933 CDD:411018
ANKYR 1063..1322 CDD:440430
ANK repeat 1088..1120 CDD:293786
ANK repeat 1124..1153 CDD:293786
ANK repeat 1155..1196 CDD:293786
ANK repeat 1199..1249 CDD:293786
ANK repeat 1251..1283 CDD:293786
ANK repeat 1285..1316 CDD:293786
SET_EHMT 1391..1622 CDD:380941 89/266 (33%)
Blue background indicates that the domain is not in the aligned region.

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