DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and set-21

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_500555.2 Gene:set-21 / 177204 WormBaseID:WBGene00021282 Length:568 Species:Caenorhabditis elegans


Alignment Length:475 Identity:102/475 - (21%)
Similarity:168/475 - (35%) Gaps:141/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VVERI-ECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTE 283
            ::||| :..|::.|..        |.::||        .|.....:|:.:     .|.:|:....
 Worm   128 LLERIRDDPELNTYYE--------YQETEN--------KDLGRCMRFIAQ-----RIVMARTNNN 171

  Fly   284 LEKQLEALPLMENITVAEV---------DAYEPLNLQIDLILLAQYRAAGSRSQREPQKI----- 334
            |.|.|    |.|..|..|:         .||||...:|        |...:.:..|...|     
 Worm   172 LMKHL----LAEQGTSTEITPESLQEYFPAYEPPKNRI--------RIKSNLTFNENDVIPVYSD 224

  Fly   335 --GERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNI 397
              || .|:|::|                            |.....:..|::.:|   .:...|:
 Worm   225 LEGE-TLESLEI----------------------------PVTLTYDYTDVNMVD---QFTEPNL 257

  Fly   398 IGKDVPKPEAG--IVGCKC--TEDTEECTASTKC-C----ARFAGELFAYER----STRRLRLRP 449
            ....:...|.|  ::.|.|  ::....|..:.|| |    .|..|  |...|    .|.....:|
 Worm   258 TKAIIMSEENGENMIRCTCCSSKPIVPCYENEKCPCFIMNQRMQG--FQIPREGCGKTEFTSFKP 320

  Fly   450 -----------GSAIYECNSRCSCDSSCSNR--LVQHGRQVPLVLFKTANGSGWGVRAATALRKG 501
                       ..|.:.|:..|.|...|:|.  |:.|.:..||.:::.....|:.||:...:..|
 Worm   321 IYFFNPKDHYYDHAGFACSELCGCGGKCTNNSMLLPHKKLFPLEIYRNDPAVGFVVRSTVMIPAG 385

  Fly   502 EFVCEYIGEII--TSDEANERGKAYDDNGRTYLFDLDY-----NTAQDSEYT------------I 547
            ..:.|:.|||:  .:.|.:.|..||.   .||..|:.:     ......|||            |
 Worm   386 TPLMEFTGEIVELKNMELDNRDYAYQ---ITYSDDVKFRRLLQEVKFSKEYTKLLEKLSRKRFFI 447

  Fly   548 DAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDYIRADNEDVPY 612
            |...:||::..:.|:|.||:.|...:.:.|:.|..|||..||..:.....|:.||         .
 Worm   448 DPKIHGNVARTVGHACAPNMEVVRVFQKSLSPAHLHLVLVTLEDVFPSVPLTIDY---------G 503

  Fly   613 ENLSTAVRVECRCGADNCRK 632
            :..:..::..|||....||:
 Worm   504 KTYTDVLKDRCRCRTFACRR 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793 10/48 (21%)
SET_SUV39H 388..634 CDD:380940 67/290 (23%)
set-21NP_500555.2 SET <336..503 CDD:394802 46/178 (26%)
Blue background indicates that the domain is not in the aligned region.

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