DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and met-1

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_491340.2 Gene:met-1 / 172026 WormBaseID:WBGene00016603 Length:1604 Species:Caenorhabditis elegans


Alignment Length:656 Identity:145/656 - (22%)
Similarity:229/656 - (34%) Gaps:192/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLE 81
            |..:|..||.|.|..||....:..:..|       |.:|            ||            
 Worm   318 QSFTNDSVSPLPPPPPEPAPAREKVENG-------GPTT------------FK------------ 351

  Fly    82 RLSEKKIKNLLTSKQQRQQYEIKQRSMLRHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTR 146
             ::.||..|:                      .:.:.|.|.:..:.|.|||:   :||:......
 Worm   352 -MTFKKAANI----------------------PILKTSAFEQPSSPPPSSSV---SSSISLSEVN 390

  Fly   147 RSTSQTS-LSPSNSSGYGSVFGCEE---HDVDKIPSLNGFAKLKRRRSS-----------CVGAP 196
            .|||..| .||:..|....:....|   ..:.::|.|:.|......||:           .:...
 Worm   391 SSTSIASESSPAKRSSNFDLTASNELPPPQMVELPKLSFFNMPPAVRSAEDDSAMTSEEPILLLR 455

  Fly   197 TPNSKRSKNNMGVIAKRPP----------------KGEYVVERIECVEMDQYQPVFFVKWLGYHD 245
            :|||....::...:...||                |...|:.|.|..|.|          :.:.:
 Worm   456 SPNSATPDDDALFLTTPPPPKMTESEIQALKVATEKVNQVIARREDSEKD----------VRHRE 510

  Fly   246 SENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNL 310
            ..:.::...:..|....:...||:.|       :.....:.:..|......:|.......|.:.|
 Worm   511 DRDDYDRRRDDRDRRSRKTDSERNDQ-------RGRQREDDERRAREREREVTKRHDREREEMRL 568

  Fly   311 QIDLILLAQYRAAGSRSQREPQKIGERALKSMQIK-RAQFVRRKQLADLALFEKRMNHVEKPSPP 374
            |                   .||..||..|..:.: :.:...:||..|.|..|:....:::.   
 Worm   569 Q-------------------KQKDEERRKKDEEERIQKENDEKKQKEDEAKMEEEKKKIKEE--- 611

  Fly   375 IRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTASTKCCARFAGELFAYE 439
               |..|....:.|...|:..|...|   |.|:  :.|:|......|:.:| |..|         
 Worm   612 ---EMKIPEFELISESKYLTRNANKK---KTES--LTCECHRTGGNCSDNT-CVNR--------- 658

  Fly   440 RSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFV 504
                       :.:.||.|  ||...|.|:.....:...:..|.|....|.|:||...::||.|:
 Worm   659 -----------AMLTECPS--SCQVKCKNQRFAKKKYAAVEAFHTGTAKGCGLRAVKDIKKGRFI 710

  Fly   505 CEYIGEIITSDEANERGKAY---DDNGRTYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPN 566
            .|||||::..|:..:|...|   ..:...||.|       ...|||||..|||.|.|:|||||||
 Worm   711 IEYIGEVVERDDYEKRKTKYAADKKHKHHYLCD-------TGVYTIDATVYGNPSRFVNHSCDPN 768

  Fly   567 LAVFPCWIEHLNVALP-------HLVFFTLRPIKAGEELSFDYIRADNEDVPYENLSTAVRVECR 624
             |:...|      ::|       .:.||:.|.||||||::|||        .:.|.....: :|.
 Worm   769 -AICEKW------SVPRTPGDVNRVGFFSKRFIKAGEEITFDY--------QFVNYGRDAQ-QCF 817

  Fly   625 CGADNC 630
            ||:.:|
 Worm   818 CGSASC 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362 13/62 (21%)
Chromo 219..268 CDD:459793 6/48 (13%)
SET_SUV39H 388..634 CDD:380940 76/253 (30%)
met-1NP_491340.2 PRK12323 <23..263 CDD:481241
AWS 637..682 CDD:197795 14/69 (20%)
SET 682..828 CDD:394802 57/165 (35%)
WW 1366..1393 CDD:238122
Blue background indicates that the domain is not in the aligned region.

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