Protein Alignment Su(var)3-9 and LOC116408207

DIOPT Version :10

• Sequence 1: NP_524357.2
• Gene: Su(var)3-9 / 41483
• FlyBaseID: FBgn0263755
• Length: 635
• Species: Drosophila melanogaster
• Sequence 2: XP_031750765.1
• Gene: LOC116408207 / 116408207
• XenbaseID: XB-GENE-29093823
• Length: 714
• Species: Xenopus tropicalis
• Alignment Length: 515
• Identity: 173/515 - (33%)
• Similarity: 253/515 - (49%)
• Gaps: 104/515 - (20%)

  Fly   161 GYGS--VFGCEEHDVDKIPSLNGFAKLKRRRSSCVGAPTPN----SKRSK------------NNM 207
            ||||  |.....:.|.:.|.......::|...:||.||...    |.:|:            .::
 Frog   264 GYGSPWVSPRIRYPVGQSPDTVPRGSVRRYALTCVCAPGCRVRCLSSQSELQEVCREEQLCCADL 328

  Fly   208 GVIAKRPPKGEYVVERIECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQL 272
            ||..|.  ..::.||.:...:..|.|.::.|||..|..||:|||               .||...
 Frog   329 GVTRKN--LSDFEVEYLCDYKKVQDQELYLVKWKYYPHSESTWE---------------PRHHLK 376

  Fly   273 YEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQ---REPQKI 334
            ....:.:...:||::                            ||.:.:|:|.|.:   |.|:::
 Frog   377 CSSVLKRFHLDLEQE----------------------------LLRRAKASGGRKRAAARWPRRL 413

  Fly   335 GERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIG 399
            .:.....:.:|..|..|.:|      :|:::|........|.|||.:||:....:|:||::..:|
 Frog   414 DQSLSHYLVLKAKQRQRLRQ------WEEQLNAKRSHRGLILVENEVDLEGPPRDFVYINEYRVG 472

  Fly   400 KDVPKPEAGIV--GCKCTEDTEECTASTKCCARFAGELFAYERSTR---RLRLRPGSAIYECNSR 459
            :.|   .||.:  ||||    .:|:|....|...|   |.::|:..   :::::||..|||||||
 Frog   473 EGV---AAGQISAGCKC----RDCSADEGGCCPGA---FLHKRAYNDEGQVKVKPGFPIYECNSR 527

  Fly   460 CSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAY 524
            |.|..||.||:||.|.|....:|:|.||.|||||....:||..||.||:||||||:||..||..|
 Frog   528 CRCGPSCPNRVVQKGIQYKFCIFRTPNGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGHIY 592

  Fly   525 DDNGRTYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTL 589
            |..|.||||||||   .:..||:|||:|||||||:||||:|||.|:..:||:.:..||.:..|..
 Frog   593 DRQGATYLFDLDY---VEDVYTVDAAHYGNISHFVNHSCEPNLQVYNVFIENRDEHLPRIALFAT 654

  Fly   590 RPIKAGEELSFDY-IRADNEDVPYENLST-------------AVRVECRCGADNCRKVLF 635
            |.|:.||||:||| ::.|..||....:.:             .|||||:||..:||:.||
 Frog   655 RTIRTGEELTFDYNMQVDPVDVESSKMDSNFGLAGLTGSPKKRVRVECKCGVSSCRQYLF 714

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(var)3-9	NP_524357.2	PTZ00327	11..>80	CDD:240362
		Chromo	219..268	CDD:459793	13/48 (27%)
		SET_SUV39H	388..634	CDD:380940	118/264 (45%)
LOC116408207	XP_031750765.1	CD_SUV39H1_like	338..386	CDD:349289	15/62 (24%)
		SET	461..714	CDD:394802	118/265 (45%)