DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and Kmt2b

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001414070.1 Gene:Kmt2b / 102550344 RGDID:7678027 Length:2714 Species:Rattus norvegicus


Alignment Length:274 Identity:81/274 - (29%)
Similarity:115/274 - (41%) Gaps:73/274 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 PPI------RVENNIDLDTIDS-NFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTASTKCCAR 430
            ||:      |.|..:...|.|. ||:.....::      ||    |..|.|:.:|...       
  Rat  2501 PPLNPHGAARAEVYLRKCTFDMFNFLASQHRVL------PE----GATCDEEEDEVQL------- 2548

  Fly   431 FAGELFAYERSTRR---LRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGV 492
                     |||||   |.| |.:..:....:.|.::....|...|||               |:
  Rat  2549 ---------RSTRRATSLEL-PMAMRFRHLKKTSKEAVGVYRSAIHGR---------------GL 2588

  Fly   493 RAATALRKGEFVCEYIGEIITSDEANERGKAYDDNG-RTYLFDLDYNTAQDSEYTIDAANYGNIS 556
            .....:..||.|.||.|.:|.|...::|.|.||..| ..|:|.:|     |.: .:||..:||.:
  Rat  2589 FCKRNIDAGEMVIEYSGIVIRSVLTDKREKFYDGKGIGCYMFRMD-----DFD-VVDATMHGNAA 2647

  Fly   557 HFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLRPIKAGEELSFDYIRADNEDVPYENLSTAVR 620
            .||||||:||     |:...::| ...|:|.|.||.|..||||::||      ..|.|:.|.  :
  Rat  2648 RFINHSCEPN-----CFSRVIHVEGQKHIVIFALRRILRGEELTYDY------KFPIEDASN--K 2699

  Fly   621 VECRCGADNCRKVL 634
            :.|.|||..||:.|
  Rat  2700 LPCNCGAKRCRRFL 2713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 74/251 (29%)
Kmt2bNP_001414070.1 zf-CXXC 956..1003 CDD:366873
PHD1_KMT2B 1202..1248 CDD:277064
PHD2_KMT2B 1250..1299 CDD:277066
PHD3_KMT2B 1336..1392 CDD:277068
Bromo_ALL-1 1373..1515 CDD:99925
ePHD_KMT2B 1580..1684 CDD:277164
FYRN 1732..1779 CDD:461787
PHA03247 <1807..2315 CDD:223021
FYRC 2412..2496 CDD:197781
SET_KMT2A_2B 2561..2714 CDD:380947 59/187 (32%)
Blue background indicates that the domain is not in the aligned region.

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