DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cog1 and Cog1

DIOPT Version :10

Sequence 1:NP_650162.1 Gene:Cog1 / 41479 FlyBaseID:FBgn0037998 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_551520.4 Gene:Cog1 / 3290456 VectorBaseID:AGAMI1_000876 Length:931 Species:Anopheles gambiae


Alignment Length:946 Identity:311/946 - (32%)
Similarity:509/946 - (53%) Gaps:83/946 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLLNLNVDTLFEQHSVSEIDEVHKKIQSVVENKREELRTHVGERYRDLLQAADTIAAMQTSAGTL 68
            :|||::||.||:||:|:|||.|||::.:.:|.|||||||.|||||||||:|||||..|:.:||::
Mosquito     6 DLLNIDVDQLFKQHNVAEIDLVHKRVLNEIELKREELRTMVGERYRDLLKAADTIGDMKQTAGSI 70

  Fly    69 MEQVRHVQANCRSLNEQQLLGFQSTANASAKDAALKERNAGKKLQTYYGTMAQIKLLTALPELIW 133
            :..|..:.|.|:.||:..|:||::..:........::.|       ::|.:.||||||:|||:||
Mosquito    71 IGNVDRITARCQQLNDHNLIGFRTGTDYQRMQKKHRDHN-------FHGVIVQIKLLTSLPEMIW 128

  Fly   134 THLDNDRFYAATELFIFSRHISTGLQLDGQSALMQKLPVARKQWEILRPFHVTIKQAILTALERE 198
            :.:|.:.::.||:||||:|||||||.||.:..:|:|.|||.|||::|..|..||:.|...:|.||
Mosquito   129 SRIDREDYFVATQLFIFARHISTGLSLDTEREMMRKFPVAAKQWQVLSQFFFTIEAACRESLGRE 193

  Fly   199 ELLQEMTVDCLQSLLLLDKSDLSTVLKSFLNLRSSAFLNCLQSGPSEPRRVKDRILASLNVLNST 263
            ||...:....|.|.|||:...:...|..|...||.|||:.|....:...:|||::||||.||..|
Mosquito   194 ELSVAVVSKSLASWLLLESCPVEQTLSMFTERRSKAFLDVLDENETVYEKVKDKLLASLKVLIGT 258

  Fly   264 VELLDKCLL--------GYSLLFSR-LEECASSTCPPSINRMESSERQLVHLLPEIIAGFKPQFD 319
            |.|..:|.:        |....|.| |:........|:|..:.|.:..::.::||:||.|:|:.:
Mosquito   259 VRLFYECFVDDGTAEADGVQGGFQRELQHITGDKAAPTIGLIRSEDPMIMQMVPEMIAKFRPRLE 323

  Fly   320 VPQLTPEQLGSSLQQWLDKMNALAAAHLQQVFALVTNMQTIQDIKSAARTNGRP-DFVRLEQQLH 383
            ...|..|.:.:::..:|..:....|..|:::.:||.:::|:.|||..|....:| ::..:..:|.
Mosquito   324 RIDLAEENVRTAVSAFLRSIETTVAGRLKRLVSLVPSIKTLHDIKRQAIALDKPSNWSAVTAKLG 388

  Fly   384 LKRSQLDFYARKYVPLINARVREIIRSSWASAMKLTYEQVLLLIEAGQSQPPLQIWREQSDDLPL 448
            |... .||||..|..|||.|::.||:|:|...::.|...:|.|:..........:|:|..||:|:
Mosquito   389 LSEG-TDFYATFYQRLINDRMQSIIKSAWTETVQKTRSDLLELLAGNPGDLKAFVWKESLDDVPM 452

  Fly   449 SLAAAL---SDQPKRLANRTKGYDGATIELCKRFDSHLADIVQELNVMLQEQTTRAEDKVSLIEF 510
            :|..||   :...::|..:..||..|.:.|....:..|..:.:::...|...|....|:  ::.:
Mosquito   453 NLETALDRSNPSTRKLLMKAHGYTPALVALIGSLNGRLQTLTRDVRSFLSSSTRSEVDE--MLAY 515

  Fly   511 LRETAEEQLTEYLSNLKGLEL---RERPALLLALRNSLALVELCPNLKLCFCQPS-----SWRQW 567
            .|:...:.:.|.::..|..|.   .||.|||  .|...|:.||||.|:.||...:     ||...
Mosquito   516 FRQCCVDGVAELITATKSAEFDPTAERYALL--ARFLTAVRELCPALRECFIPTTIGLADSWHAG 578

  Fly   568 TDNSAGLGI-----EHWQRICGLIEKEMLSFWLVIVDDVLAGHNCEEKLPKV---INHEVVLSDF 624
            ..:|:.:.:     |.|.::.||:|.|.|..|.:.|:      ..:::.|.:   :.::.:|:||
Mosquito   579 RTSSSTVAMPEEDPERWAKVAGLLEDESLQCWTLWVE------RFQQRWPTLSADVGYDALLNDF 637

  Fly   625 ALWQTLTLEQRDEDQEQSVQSTIRIPSQPRLSLQTYLHQLIQALNSVVPQTLPPKVLQAFIQRLI 689
            .:|:|:|:|:.||: .|.:|||||:||||...:|..||.:.:.||..:|||:|...:...::||.
Mosquito   638 PVWETVTIEENDEN-NQPIQSTIRVPSQPSFPVQKCLHHVYELLNEAIPQTIPRPTMLDIVERLA 701

  Fly   690 GKLLCHYEGLAHAECTKASQNIALQLYFDLKFLERVFAISREERTLYDQIHAQQNQLRDYIDPFD 754
            ..||.||:.||..|..:.:|::|||.|.|::||: :..:.||::.|.::.:....:.:.||||||
Mosquito   702 TMLLKHYDVLAGTEFVQQNQSLALQYYLDVRFLQ-LLLMGREQKQLNERFNELVGRFKSYIDPFD 765

  Fly   755 FELFAEHITAHVSRAASRLQGELGVLT--PSAAAPSQGAAAASSLAHEADPNVLCLSSSGSTSLW 817
            |::|..|:.|:|.|:..:||..||.|.  ........|.:.|.:...:.:||:|.|||:....:|
Mosquito   766 FDVFYGHLNANVKRSILKLQHFLGALICHSEQLGTIVGPSGAGTEPLDKNPNILTLSSNSLNMVW 830

  Fly   818 FPLLPIVMPQAA-------GRVTSAERKSPIQEPVE-------------------------KTAT 850
            |||||:|....|       |..|::.....::|..:                         .|..
Mosquito   831 FPLLPVVCKDTASATAGSSGLTTASLGGDSLKEQQKGKSASGGGESGKSTLGSSSGNSAAGTTKQ 895

  Fly   851 TTPTRKSGGNGARKGDSSKSKSSAASFFGMSQEWFR 886
            :|....:||:....|.:......||:|||:.::|||
Mosquito   896 STKEATAGGSSTSAGTAQNYAKGAAAFFGLDKDWFR 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog1NP_650162.1 Vps51 7..84 CDD:462568 43/76 (57%)
Cog1XP_551520.4 None

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