DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango9 and gms2

DIOPT Version :10

Sequence 1:NP_650136.1 Gene:Tango9 / 41450 FlyBaseID:FBgn0260744 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_592886.1 Gene:gms2 / 2542918 PomBaseID:SPAC12G12.12 Length:324 Species:Schizosaccharomyces pombe


Alignment Length:353 Identity:91/353 - (25%)
Similarity:154/353 - (43%) Gaps:48/353 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VFLSLIFVLSGTFNVLVVKW----ANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVFKVIR 65
            :.|.:|.:.||..|.::.|:    |.:.:.|.|        ..|:.:|.:|||| .|...:.:.:
pombe     1 MLLPIIMLTSGVANTVLSKYQDSIAEESEPIKS--------MAVLQSLNIFLGE-ACLWFYVLYK 56

  Fly    66 LISNRRGVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQMIRGAALIFV 130
            ..|...|..| ||.:..:     ..|.|.||.::|...|.|:..||..|.|:.:||.||:.:|||
pombe    57 RHSQGPGYES-LDHLPLK-----HKVFMALPAIMDICGSTLMNVGLLYTSASIYQMTRGSLIIFV 115

  Fly   131 GIFSTMFLNHTLTGRHWLAIFTISCGLLDIISLDVHRVEYDLVTLPYTDYKSI----LTGDLLII 191
            .:|:|..|..|:....||:        |..:.|.|..|.|.      ....||    :.|...::
pombe   116 ALFATTLLKRTIGQLQWLS--------LSFVVLGVAIVGYS------GSSSSIGSNPILGITAVL 166

  Fly   192 IAEILHGLQYVCEEKQLKTSNVAPLQAAGWQGIFGLGITSMLAICMNFLPSIDPFSCSSRAVFDD 256
            |.:.....|:..||..|....|.|.:...::|.:|:... :|.:.:::.     |..|:.|.:..
pombe   167 IGQFFLATQFTIEEYILSFIQVDPSELVAYEGTYGVFFV-LLGMIISYY-----FIGSTTAGYHG 225

  Fly   257 WGDLFAALQGSISLIMTLIAFT----ISCAMYNFIGLYIAMYSSSANRLLADGLRVYFIWVFVII 317
            |.| ::.:....:.:..|...:    :|.|.:|..||.|....|:..|.|.|..|.:.||:..:.
pombe   226 WFD-YSHVISRFNEVPALYVISGVILVSIAFFNVSGLAITKLHSATTRSLLDIARTFGIWIIAMA 289

  Fly   318 MEWEYMNLVTIMGFLILQMGIILYRQAL 345
            |..|..:|:..:||::|..||..|...:
pombe   290 MGMESFHLLQFLGFVLLIYGIFTYHSII 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango9NP_650136.1 None
gms2NP_592886.1 Nuc_sug_transp <78..>167 CDD:398009 31/102 (30%)
RhaT <88..311 CDD:440461 63/243 (26%)

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