DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-a and YCR001W

DIOPT Version :10

Sequence 1:NP_788639.1 Gene:ClC-a / 41428 FlyBaseID:FBgn0051116 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_001335748.1 Gene:YCR001W / 850357 SGDID:S000000594 Length:104 Species:Saccharomyces cerevisiae


Alignment Length:81 Identity:16/81 - (19%)
Similarity:28/81 - (34%) Gaps:30/81 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VERIIHDEEFGEENVELVDSEWADFEKFICQLR------------KRRNSAMSMEEELRHVQRHP 72
            ::::.|.:.:||.|:.:.      :.||.|..:            |...:|.|..          
Yeast     5 LKKLKHIDSYGESNLSMF------YLKFYCPWKLCPLLPILYGRNKSVQNAWSCH---------- 53

  Fly    73 KIKSHAFYPCPPPAEN 88
              |.|.|...|.|:.|
Yeast    54 --KLHRFIDFPTPSAN 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-aNP_788639.1 ClC_1_like 171..646 CDD:239655
CBS_pair_SF 659..>718 CDD:449531
CBS repeat 664..715 CDD:341358
CBS_pair_SF <1032..1096 CDD:449531
CBS repeat 1053..1095 CDD:341358
YCR001WNP_001335748.1 None
Blue background indicates that the domain is not in the aligned region.

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