DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-a and SPOM_SPBC19C7.11

DIOPT Version :10

Sequence 1:NP_788639.1 Gene:ClC-a / 41428 FlyBaseID:FBgn0051116 Length:1193 Species:Drosophila melanogaster
Sequence 2:NP_596167.2 Gene:SPOM_SPBC19C7.11 / 2540750 PomBaseID:SPBC19C7.11 Length:766 Species:Schizosaccharomyces pombe


Alignment Length:671 Identity:175/671 - (26%)
Similarity:303/671 - (45%) Gaps:121/671 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FAKDEARKLKILEKRRK-------------QEDKQRNKELLGKHSTRAKRVSSW--IWRHTVARL 168
            |.:.|.|.|...|:::|             :.|.:.|:.:..::.......|.|  :||  :..:
pombe    13 FDQAERRSLDENERKKKYFFNREGSGIDNFETDDRVNEIINEQNEENVIDQSRWSKLWR--IWNV 75

  Fly   169 GEDWVFLALLGIIMALLSFIMD----------KGI--------------------SICTNARIWL 203
            |..|..|:::|..:...::::|          :|.                    |.||..:.|.
pombe    76 GYSWFILSIIGTTVGFAAYMLDIVTSWLSDIRRGYCTSHWYYNEKFCCWYSETMGSSCTAWKPWT 140

  Fly   204 YRDLTSQPF-VQYIAWVSLPVCLILFSAGFVHLIAPQSIGSGIPEMKTILRGVQLKEYLTFKTLV 267
            |:      | :.|:.:.:..:..:|.:|..|..:||.:.||||.|:|.|:.|.....:|:|:.::
pombe   141 YK------FSLNYLIYTAFALLFVLCAAIMVRDVAPLAAGSGISEIKCIISGFLRDSFLSFRVML 199

  Fly   268 AKVIGLTATLGSGMPLGKEGPFVHIASIVAQLLSKLVTSFQGIYENESRNSEMLAAACAVGVGAC 332
            .|.:||...:.||:.:|||||.||:|:.:...:||:   |:...|...|..::..|:.|.||...
pombe   200 VKCVGLPLAIASGLSVGKEGPSVHLATTIGHNISKI---FKYAREGSIRYRDICVASAASGVAVA 261

  Fly   333 FAAPVGGVLFSIEVTTTYFAVRNYWRGFFAAVCGATVFRLLAVWFQNADTVRALFLTNFTTEFPF 397
            |.:|:|||||.||..:..:..:.....||..:....|..:|.. |:....|  ||...::..:.|
pombe   262 FGSPIGGVLFGIEEMSGGYDPKMIVYSFFCCLSAVGVLHMLNP-FRTGQVV--LFEVRYSGSWHF 323

  Fly   398 DPQELFVFALIGLVCGLGGASYVWVHRRYVLFMRSNKRMNKFLQKNRFLYPGFLALLVSSISF-- 460
              .||..|..:|:..||.|.   :|.|.:.|..:..|   |:|.:...|...|:.::.|.:||  
pombe   324 --FELLFFCFLGIFGGLYGE---FVMRLFFLIQKLRK---KYLSRWGVLDAAFVTVITSLVSFLN 380

  Fly   461 PLGTGQFLAGELSTHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGNLVIYTLFT---- 521
            |                         |.|.|:|:....:.....:|.:....||...:|.|    
pombe   381 P-------------------------WLRLDMTLGMELLFQECKSSSSPELINLCDPSLRTKNTI 420

  Fly   522 -FVVSIIASTI--------PVPSGMFIPVFKIGAGFGRLVG---EFMAVTFPHGVRY---GGRLS 571
             .:::..|.||        .||:|:|:|...:||.||.::|   |.:...||:.|.:   .|..|
pombe   421 LLLIATFARTIFVTFSYGAKVPAGIFVPSMAVGASFGYMIGLIAEMIYQRFPNSVLFLACHGSES 485

  Fly   572 PIMPGGYAVVGAAAFSGSVTH-TVSVAVIIFEMTGQITHVVPVMIAVLVANAVAALL-QPSIYDS 634
            .|.||.||::||||....:.| ||::.||:||:||.:..::|.::.|.:||::..:| :..|.|.
pombe   486 CITPGTYALLGAAASLSGIMHLTVTIVVIMFELTGALNFILPTVLVVALANSIGNMLGKTGIADR 550

  Fly   635 IILIKKLPYL-PDLLPSSSGMYSIFVEDFMVRDVKYIWH-GISYQKLKEVLKLNKTLRSLPLV-D 696
            .|.|..||.| |:...:||...:|.:.:.|..::..|.. |.:::||..::: .......|:| |
pombe   551 SIEINGLPLLEPEKSINSSNTINIPITEVMASNLITIPSIGFTWRKLLGMME-GYDFSGYPVVLD 614

  Fly   697 SPDNMILLGSVQRYELIKMIE 717
            |..| .|:|.:::..|....|
pombe   615 SRSN-YLIGYLKKSSLKSSFE 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-aNP_788639.1 ClC_1_like 171..646 CDD:239655 144/529 (27%)
CBS_pair_SF 659..>718 CDD:449531 14/61 (23%)
CBS repeat 664..715 CDD:341358 12/52 (23%)
CBS_pair_SF <1032..1096 CDD:449531
CBS repeat 1053..1095 CDD:341358
SPOM_SPBC19C7.11NP_596167.2 ClC_3_like 86..560 CDD:239656 141/518 (27%)
CBS_pair_voltage-gated_CLC_euk_bac 575..724 CDD:341367 14/62 (23%)
CBS repeat 581..675 CDD:341367 13/56 (23%)
CBS repeat 681..723 CDD:341367
Blue background indicates that the domain is not in the aligned region.

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