DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClC-a and XB22062446

DIOPT Version :10

Sequence 1:NP_788639.1 Gene:ClC-a / 41428 FlyBaseID:FBgn0051116 Length:1193 Species:Drosophila melanogaster
Sequence 2:XP_002934155.3 Gene:XB22062446 / 100488828 XenbaseID:XB-GENE-22062447 Length:818 Species:Xenopus tropicalis


Alignment Length:791 Identity:181/791 - (22%)
Similarity:316/791 - (39%) Gaps:151/791 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LGEF-AKDEARKLKILEKRRKQEDKQRNKELLGKHSTRAKRVSSWIWRHTVARLGEDWVFLALLG 179
            |.|| ..|:.....|..|:::.::...:...|..||...|   :|:....:....:.|..:.|:|
 Frog    30 LDEFDGMDQHMSNGICHKKKEFQETPESLNYLPSHSEAYK---TWLEEKPLGSDWDRWFMMGLIG 91

  Fly   180 IIMALLSFIMDKGISICTNARIWLYRD-LTSQPFVQYIAWV---SLPVCLILFSAGFVHLIAPQS 240
            :.:.:..|:|.:.|......:..|..: :.:..|:  ..|:   .:...::|.|:|.|....|..
 Frog    92 VFVGIFGFLMHQIIDFLFEMKWELVENYIQNNDFL--TTWMVIAGIGFAMMLVSSGLVVFFCPSG 154

  Fly   241 IGSGIPEMKTILRGVQLKEYLTFKTLVAKVIGLTATLGSGMPLGKEGPFVHIASIVAQLLSKLVT 305
            ..||:||:...|.|..::.....:|...........:.:|:..|.|.|.:|:.:.:...||:..:
 Frog   155 SPSGLPEVIGYLNGASIRHIFNIRTFFGSFFSCALAVSAGLFCGPEAPMIHVGAAIGCGLSQFKS 219

  Fly   306 S-------FQGIYENESRNSEMLAAACAVGVGACFAAPVGGVLFSIEVTTTYFAVRNYWRGFFAA 363
            .       |...:.|.:...:.:.|..|.|:.:.|.|||||:||.:|...:::.|:..|:.||..
 Frog   220 DTLRINLPFFTRFRNSADKRQFITAGAAAGIASVFRAPVGGLLFVLEEVASFWDVKLAWQTFFCC 284

  Fly   364 VCGATVFRLLAVWFQNAD----------TVRALFLTNFTTEFPFDPQELFVFALI-----GLVCG 413
            :.......:|:..|...:          ..|.:|...       |...:.|.|:|     |::.|
 Frog   285 LVATFTTEVLSSSFVGFEYEGYFGFFKAEQRIIFWVK-------DLLNISVLAVIPTIILGIIGG 342

  Fly   414 LGGASYVWVHRRYVLFMRSNK-RM-------NKFLQKNRFLYPGFLALLV------------SSI 458
            |.||.:|:::      :|.|| ||       :|||::...|....|.|:|            |..
 Frog   343 LLGALFVFIN------VRINKLRMKIFTSVPHKFLRQLTKLLDTLLILVVTITVTVYIPYFFSCS 401

  Fly   459 SFPLGTGQFLAGELSTHEQVTQLFSNFTWSRDDLTVEQAAVVTHWMTSYTSVFGN---------- 513
            ..|..:....|.|...|.:      :..|   |::.......:.|:....|:..|          
 Frog   402 PNPTASQVQNASEHKPHGE------HAAW---DVSEYNCPPGSSWVAPNGSIMANHSINQAAVLL 457

  Fly   514 ------------------------LVIYTLFTFVVSIIASTIPVPSGMFIPVFKIGAGFGRLVGE 554
                                    |::..:|.|.:|...:.....:|:.:|:...||.||||||.
 Frog   458 VKNGKQGTMLLYQRGSHEKFGLPALLMALIFYFTISCWTAGTAAGTGLVVPMVYTGALFGRLVGL 522

  Fly   555 FMAVTFPHGVR---YGGRLSPIMPGGYAVVGAAAFSGSVTH-TVSVAVIIFEMTGQITHVVPVMI 615
            .|...|  ||:   ||..:.   ||.:||:|:||:.|.||. |:|:.||:.|:|..:..::.:||
 Frog   523 IMVAMF--GVQTDEYGAWID---PGLFAVIGSAAYFGGVTRLTISLTVIMVEITNDVQSILLIMI 582

  Fly   616 AVLVANAVAALLQPSIYDSIILIKKLPYLPDLLPSSSGMYSIFVEDFMVRDVKYIWHGISYQK-- 678
            ||||...|......|::.|::.:|.:|||..:.....|...:.:|.|..|||......|..|:  
 Frog   583 AVLVGKTVGDYFNNSLFSSLLHLKCIPYLKAVPNVVHGKKKVNLELFTARDVMQSCTTIHLQENV 647

  Fly   679 --LKEVLKLNKTLRSLPLVDSP---DNMILLGSVQRYELIKMIEKHIGREKRMEVAQKWQKEAQE 738
              |.|:|. ..:....|:|.||   ...:.||::.|.||..::       ....|.|..:.....
 Frog   648 FLLAELLS-TTSHNGFPVVFSPAPGQEEVFLGTITRLELYMLL-------SNSRVFQTPENNQCS 704

  Fly   739 RALEEEKKKQEVELKMRRPSRFEVLPAPDILSLRQIANDEMLPPKKRAETMHGSLAP--RKSILK 801
            ..|    |.|||.::          ..||...:.::.|.....|  :.:.:..:|.|  .||.:.
 Frog   705 SVL----KYQEVTVE----------KLPDEAQINRLLNKYSADP--QYQQLFINLEPYINKSAVS 753

  Fly   802 KTNSFNL-KTY 811
            ....|:| :||
 Frog   754 VQAHFSLQRTY 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClC-aNP_788639.1 ClC_1_like 171..646 CDD:239655 131/558 (23%)
CBS_pair_SF 659..>718 CDD:449531 19/65 (29%)
CBS repeat 664..715 CDD:341358 17/57 (30%)
CBS_pair_SF <1032..1096 CDD:449531
CBS repeat 1053..1095 CDD:341358
XB22062446XP_002934155.3 Voltage_gated_ClC 56..618 CDD:445960 136/593 (23%)
CBS_pair_voltage-gated_CLC_euk_bac 630..793 CDD:341367 36/159 (23%)
CBS repeat 636..746 CDD:341367 26/133 (20%)
CBS repeat 752..793 CDD:341367 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.

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