DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbf and Mtmr6

DIOPT Version :10

Sequence 1:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster
Sequence 2:NP_726322.1 Gene:Mtmr6 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster


Alignment Length:916 Identity:178/916 - (19%)
Similarity:321/916 - (35%) Gaps:290/916 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1017 LQLRSSSFQLIKVAFDPEVTPEQIES----------------FRKILSKARHPFDEFEYFAFQSY 1065
            ::.:.|....::::|| .::||..|.                ..|::|.....|:|..  .|.:.
  Fly    13 IERQLSPTSALRLSFD-NISPETEEPPDGNKRLWGVPVPPFVSEKVVSWIEEEFNEAP--VFYNG 74

  Fly  1066 GTMLQGVAPLKTKEKYSTLKGFAKKTLLRGAKKAGFKQKQQTKRKLVSDYDYGSAD--------- 1121
            .::|:.|..::..::|:| |.....||...|....|.:....|...:......|.:         
  Fly    75 NSVLKKVENVRMIDRYNT-KNPTVGTLYLTATHLIFVEPDSNKETWILHMHVASIEKLPLSTTGS 138

  Fly  1122 -----AQETQSIDDELEDGDEFETQNNAMPRLLTTKDVERMRERSYVQD---------WKRLGFD 1172
                 .:...|:...:....|......::.:|.....:.::...:|..:         |.....:
  Fly   139 PLLIRCKTFLSVTFVIPKDSECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAGWDYFKLE 203

  Fly  1173 AE------SQRGFRISNANTSYATCRSYPAIIVAPVQCSDAAIMHLGRCFKGQRIPLPTWRHANG 1231
            ||      ....:.:.:.|..|..|.:||..|..|.:.:...::...|.....|:|:.|:.|.|.
  Fly   204 AEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLHNNK 268

  Fly  1232 ALLIRGGQPNS---------KSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALINTMPKLTPLA 1287
            |.:.|..||.|         :.::..::.|..:|.               ::.:::|.|::..:|
  Fly   269 ASICRCSQPLSGFSARCLEDEQMLEAIRKTNSNTD---------------YMYVVDTRPRINAMA 318

  Fly  1288 LNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTMKGNPKNSLAH 1352
                                                       |:::  |||             
  Fly   319 -------------------------------------------NRAA--GKG------------- 325

  Fly  1353 PFRKMRLYALGEKSQAKSNMNVDFCADFIPVDYPDIRQSRPAFKKLIRACMPSHNTNEADGQSFA 1417
             :.....|.           |:.|  .|:.::  :|...|.:.:|::.||.....|..|    |.
  Fly   326 -YENEAFYE-----------NIKF--HFLGIE--NIHVQRASLQKVLEACEQKSPTMSA----FI 370

  Fly  1418 KMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQLCLDPYYRSLDGF 1482
            ..:|.|.||:.|.|::..|..:.:.:| :..||::...||.|.|||:.|:|||.|:||||::.||
  Fly   371 NALESSGWLKHIRSILDTSSFIANAVD-KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGF 434

  Fly  1483 RVLVEKEWLAFGHRFAHRSNLKPSHANTNI-AFAPTFLQFLDVVHQLQRQFPMAFEFNDFYLRFL 1546
            :.|:||:||||||:|:.|.    .|..|:. ..:|.|.||||...||..|...|||||:.:|..|
  Fly   435 QALIEKDWLAFGHKFSERC----GHIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLIL 495

  Fly  1547 AYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATNGSDDECSVYPL----- 1606
            ..|..||:|.||:.:||.:|.|..:           |:..|...|...|..::  .:.||     
  Fly   496 HDHVHSCQFGTFVGNCEKDRLDLKL-----------AERTFSLWGYMANHLNE--YINPLYKPNV 547

  Fly  1607 --DIRSQRAPA-----------------PLNRIG----------HSIFDYIERQHNKTPIFYNFL 1642
              .|::..||.                 |...:|          :|:.|:::....:...|.|::
  Fly   548 DEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYI 612

  Fly  1643 YSGDKSVTLRPQNNVAALDLWCYYTNEELAQGAPYDLEVTTVDDEIDLSETKGKRMVITAGYDNM 1707
            ....|.:                    :.|..||     ..|:.|:..:|....:.    .||..
  Fly   613 SKSAKKL--------------------QDATSAP-----GKVNKELSSNEINDNKY----NYDKK 648

  Fly  1708 EKCNPSAYVCLLSEVKQAETERGHLPQKWLQVWNSLEVPQLEPVARNTSLGNIFVQTHQ------ 1766
                       |||:..|:.:.   |.|                |.|.|..::.:...|      
  Fly   649 -----------LSELSAADDDH---PLK----------------ASNMSFASLSLSAEQSSPPQA 683

  Fly  1767 --HKRSTLEIIMKGRLAGYQDKYFHPHRFEKHPYTTPTNCNHCTKLLWGPVGYRCMDCGNSYHEK 1829
              .:.:::.:..|                   |....|.|:..|..........|..||:.:.|:
  Fly   684 LPEEINSVAVDWK-------------------PMRNVTTCSCSTPFDQFSKKTHCWRCGDIFCER 729

  Fly  1830 CTEHSM 1835
            |.:.::
  Fly   730 CIDKNV 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:460461
dDENN 384..452 CDD:129037
SBF2 584..807 CDD:463536
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 7/45 (16%)
PTP-MTMR5-like 1179..1531 CDD:350382 87/361 (24%)
C1_Sbf-like 1790..1840 CDD:410377 9/46 (20%)
PH_Sbf1_hMTMR5 1888..1993 CDD:269941
Mtmr6NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 14/95 (15%)
PTP-MTMR6-like 202..501 CDD:350380 98/396 (25%)
FYVE_MTMR_unchar 693..753 CDD:277277 10/62 (16%)
Blue background indicates that the domain is not in the aligned region.

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