DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prd1 and plekhm2

DIOPT Version :10

Sequence 1:NP_650115.1 Gene:prd1 / 41425 FlyBaseID:FBgn0037949 Length:1354 Species:Drosophila melanogaster
Sequence 2:NP_001124255.1 Gene:plekhm2 / 564823 ZFINID:ZDB-GENE-081022-169 Length:994 Species:Danio rerio


Alignment Length:1077 Identity:201/1077 - (18%)
Similarity:349/1077 - (32%) Gaps:366/1077 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 YYSEPNIGDADSPKVKSVWNKEKKPKSSCLKKTKLH-----TNVILEQDLNGRVKKFNVHDIKHQ 359
            ||...|:.|.:          |:.|.|..|   .||     |:..||.|             ...
Zfish   169 YYKPQNLLDFE----------ERLPSSDSL---SLHSFTSLTSTNLEWD-------------DSA 207

  Fly   360 LLDNSSKMIFGSLKSIF-TMPL----------PERGVPEGSEDLQAVV-ECVPELEQTPEHKSRP 412
            :..:|....||.:..:. ::|.          |..|......|.|.|| :||.........::..
Zfish   208 IAPSSEDYDFGDIFPVLQSLPSADWEEGDLTDPVSGPRSSGSDPQTVVSDCVVVKASAGTIRTTS 272

  Fly   413 AAESPPLRAKPFLSKS-LDGSKQAQPVKKFVHNVDEQLRHKNEDDGASSTEASPMESKQSLMLHR 476
            .:.||..|..||...| .:.|....|    ||..........||...:|||.      :.:.:.|
Zfish   273 LSRSPTFRQNPFTEDSDTNTSADVTP----VHIASRHTSTTGEDAEITSTEL------EVIRMAR 327

  Fly   477 QEEFDKETVPMGSAQGEFRSKFIINCESTVFEHTGVSYETGD----LQSELSSGIQHTSVAS--- 534
            :.:..|:....||:         ::.|..|     :|.|..|    :..|....:.|.:|.|   
Zfish   328 RRKPGKKRRGRGSS---------VSSEQNV-----ISPEVTDECLQIVVERDVTVNHITVDSRVP 378

  Fly   535 LLEQNTPIAEPAASQIKKSFLDAPIAKTFSNFFRSFKDSTPVAKDEQAVT--DNYFASKIAKPQQ 597
            |...::..:||..:..::...:.|              .|.:...|...|  ||     :.:|.:
Zfish   379 LERADSTASEPLRNGRREGEEEEP--------------ETGLRLPEMTDTSMDN-----VGQPLR 424

  Fly   598 QAPAAGKLQRNFSSSTISEPSSNTNTSSNHQIAMNPQLGNAERQSRHLPSPLKKRGQ-PLQPPRY 661
            :  ...:|..:..:...:|.....:....:|.......|...      |.|.....| ||.|..:
Zfish   425 E--VMDRLNGSLDAEDGAEEICTAHDGPPNQQPFREDAGGEP------PDPSDGFLQAPLPPADF 481

  Fly   662 Y--DQQHPHQSRSLHSPSAYLAAGRGGPGGSGRDSKSTILSEEFDDILTITTTDTTNARSMDSDL 724
            |  ..|.|..:.|        ..||....|.|......:.:|:..:                   
Zfish   482 YCFTSQSPDPAAS--------GGGRHDSAGHGEPQDVPVSNEDEGE------------------- 519

  Fly   725 VIVDYTDVDYAHLLKPPAPAAKTSLINRFLRNVTQKKIMETSIRKNNFFADKLRTEQRHAGSDLY 789
                 .:.:.|...:.|:.|.:||          :||:.:|.      ..|:..|:..||..   
Zfish   520 -----AEAEAAAAGQDPSIAIETS----------EKKLSQTE------EDDEDATQSSHAAE--- 560

  Fly   790 VKGARPKNYELIDDLNAEIAMEIEMCGTNSPRRELAISLDNDFQGNLSNFELGIGEISIDVFKGK 854
                                                ..:||:.          :..:.|.||   
Zfish   561 ------------------------------------FKVDNNH----------LLLLMIHVF--- 576

  Fly   855 SLFNLKQSNEQLMKAFKLYTGYNVDGIMTPVLVLLTDKTLYVVNMEG--NSLCVKFVLAYKDLDV 917
                 :::.|||.|..::.||: ::|.:.|:.:||||..:|::....  ....|:..::|.:||.
Zfish   577 -----RENEEQLFKMVRMSTGH-MEGDLQPLYLLLTDCYIYLLRKGAAEKPYSVEEAVSYNELDY 635

  Fly   918 ILMGPFGNTVLLSNSNRDMQQVLLAGG----------------------PYPAGSLVANLELCAR 960
            |.:|....|:.|..:||..|.:|....                      |||:            
Zfish   636 ISVGLHQQTITLVCTNRRRQFLLDTADSSLTDWFLTVLKEAWENGCREPPYPS------------ 688

  Fly   961 RSGSTLPAVGQLTLEHLAPLQAFVRANSCVGVAEHWM-LYAVVNVPAGGSMRVESPSELLG---- 1020
                   .:...|:|.|| |..||...:...::|..: ||::|:......:.|.||:...|    
Zfish   689 -------ILTDATMEKLA-LSKFVCQETHCEMSEMKIRLYSLVHWEDPMDVTVASPTSPSGSRAS 745

  Fly  1021 -PSMKGFLMHRRLRQTISTSAANRIFWQPGYFLLKAGVLYMFNDSTQRLP--SWAMALAECQGAR 1082
             .:.:|.|::|     ..:|...:..|:..|.:|..|:||.:.:.|...|  |..|....|.|.|
Zfish   746 SSTKEGPLLYR-----AGSSYLGKEVWKSCYLVLSNGILYQYAERTDVTPLMSVTMGGGHCGGCR 805

  Fly  1083 RTVKSERPHCFEITL-KGEVLQMAAPDEYVASEWLQALLQSAS-GLVVQ-EEKHKTLGCTLIVTD 1144
            |:..:|:||.|::.| :.:.|:::|.:|...::|:..|.||.| |::.| ......:.|.|::||
Zfish   806 RSNSTEKPHTFQVILTEHQPLELSAENELEMADWMLLLCQSVSKGIIPQGVAPAPCIPCCLVLTD 870

  Fly  1145 NHLITLREDFSAPLRKISQQADNNAAVQGNKETMLEEDMLSVFETSSLMGSTISTPTRGTQHSYS 1209
            ..|:|..:|.                                                       
Zfish   871 RKLLTCHQDC------------------------------------------------------- 880

  Fly  1210 SLSSTPTKQTNEDAAPKETVASPEKSQRMTSVYGKNSGLAILTCADIKEMTGIKITSRSETWWCI 1274
                                        .||.:....|      ||:.::|.:.:....|  :|:
Zfish   881 ----------------------------QTSFFRSLGG------ADLNDVTAVCLEDDKE--YCV 909

  Fly  1275 LEFSCQEAPLENQDDLVIFFASSMEMQRFLRLLEQLW 1311
            :||:  |...:.....|::|:...|..|.:..|.|.|
Zfish   910 IEFA--EDRAQFLPPWVLYFSGCKERDRLIAELSQAW 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prd1NP_650115.1 PH_SKIP 1022..1126 CDD:270119 31/107 (29%)
plekhm2NP_001124255.1 RUN_PLEKHM2 9..153 CDD:439042
PH_SKIP 748..850 CDD:270119 31/106 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.