DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrp4 and abc2

DIOPT Version :10

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_593943.3 Gene:abc2 / 2543193 PomBaseID:SPAC3F10.11C Length:1478 Species:Schizosaccharomyces pombe


Alignment Length:1342 Identity:442/1342 - (32%)
Similarity:699/1342 - (52%) Gaps:134/1342 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSDSLGDRLCAAWDEQVAKNETPRLGRALTKVF 85
            |.:.|.:..|::..|.:..|.:.|.:......:|.:|.......|.....|.::           
pombe   199 SRISFGWLSPLMKFGYRNYLTESDAWSLPPAERSSNLTIVFEKNWISHAKKKKS----------- 252

  Fly    86 GFHLFITGVFLLAQEFLTKVTQPICLI-GVMAYFAGN-----------------DPDRSKAQLWA 132
              .|::.||..|....||.|...:.|: .|:|:...|                 .|.:....|..
pombe   253 --SLYMWGVLFLNHWKLTVVIIVLKLVQDVVAFIQPNLIRKIVIFVSSYSSEHPQPPQVGFSLAI 315

  Fly   133 AGLIAGSVFSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQVVNLLSNDVG 197
            |..:...|.:..:...:.||:: |||:.|..|.:.||||:||||..|....:||.:||.:|.|..
pombe   316 AMFLTNVVQTALLQQYFQLGMV-LGMRWRSELITAIYRKSLRLSSAARQSRSVGDIVNYMSVDTQ 379

  Fly   198 RF-DLVLINVHYLWI---APLELI-AVTYLMYLEIGISSMFGVAIMLLFLPFQSYLGKRTSVLRL 257
            :. ||.:    :|::   .|.::: |:|.|.:| :|..::.|..:..|..|....:.......:.
pombe   380 KVCDLTM----FLFVIVSGPFQIVLALTNLYHL-VGYGALSGAFVTFLLFPCNVVIASIFKRFQN 439

  Fly   258 RTALRTDERVRMMNEIISGIQVIKMYAWEKPF-GKVVEMTRFNEMLCIKQVNYIRGILISFAMFL 321
            |.....|.|.:.|.|||:.|:.||:||||..| .|::::....|:..:|::..:..| .:|....
pombe   440 RQMKNKDARSQFMTEIINNIRSIKLYAWENIFLQKLLQLRNTRELRMLKKIGIVNTI-GNFTWLF 503

  Fly   322 SRIFTSSSLIA--FVLLG--NILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSVRRLEA 382
            :.|..|::...  .||.|  .:|:.:..|...:.:|:|:..:|| .|..:|...|..|::.|:..
pombe   504 APILVSAATFGTFIVLYGKTRVLSVDIVFACLSLFNLLQFPLTM-LPIVVSSVLEASVAISRIYG 567

  Fly   383 FMHRPETKVRDKSKVKNANQKAESPNGDSPKGNGIPENLIEFSQFQARWE---SHSLEPTLEDIN 444
            |:...|.         ::|.....|....|.|     ..:|..:....|.   .::.||||.||:
pombe   568 FLTAGEL---------DSNAVQRYPANKEPSG-----VCLEIKKGTFSWSGPGQNAAEPTLRDID 618

  Fly   445 LQLGRRKLVAVIGPVGAGKSSLIQAILGELPGESGTLRINGSYSYAAQEPWLFTGTVRQNILFGL 509
            ....|.:|..::|.||.|||||::|.||.:...||::...||.:||||:||:...|:::||||||
pombe   619 FVARRGELCCIVGKVGMGKSSLLEACLGNMQKHSGSVFRCGSIAYAAQQPWILNATIQENILFGL 683

  Fly   510 DWDKHRYRTVVKKCALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDPL 574
            :.|...|...::.|.|.||||:|..||:|.|||:|.|||||||||||||||||.|:|||||||.|
pombe   684 ELDPEFYEKTIRACCLLRDFEILADGDQTEVGEKGISLSGGQKARISLARAVYSRSDIYLLDDIL 748

  Fly   575 SAVDTHVGRHLFDQCM--RGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGL 637
            ||||.||.|.|....:  :|.|||..|||.|:.|..|::|.:|.::..|:|...|:         
pombe   749 SAVDQHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMIYMLRNGKIIESGS--------- 804

  Fly   638 DFAQLLTAPNKD----AEDLDEIDGAGGDGLDLLNVPSLSRRGSKNSKPSTRNNSFTSLSSMAES 698
             |.||.::|:..    ..:..:.|.|...|.|.....|.|...|.....|:.:.|..::|:..::
pombe   805 -FTQLSSSPDSQLFQLLSEFSKKDTASSTGADTPLSRSQSVITSSTDVTSSASRSSDTVSNYPKA 868

  Fly   699 MAQ---------------EASLQMQETRVEGKIGLGLYKEYLTSGSSWFMIFFMVFLCLATQILC 748
            ..:               :|:.|..|....||:...:|..|. ...|.|:||......:....:.
pombe   869 TIKGTGRIRKRLTDEDNVKATGQAAEKMERGKVKWKVYWTYF-KACSLFLIFLYFLFIIGGIGMN 932

  Fly   749 SAADYFLSYWVDKNVDGQTDINTDPQDMYY------FAALNVAVVVFTIVRTMLFYKMAMRSSTQ 807
            ...:.:|.:|.:.|    |.:..:|:..:|      |..|:.|::..:.:...:|  .|::|...
pombe   933 VGTNVWLKHWSEVN----TQLGYNPKPYFYLGIYTLFGLLSCALISLSSLTITVF--CAIKSCRY 991

  Fly   808 LHNAMYQGITRAAMYFFNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIVVICITN 872
            ||::|.:.:.||.|.||.|.|:||||||||.|:.::|||:..|.:...:....::.::.|||.::
pombe   992 LHDSMVKAVLRAPMSFFETTPTGRILNRFSSDVYRVDEVISRVFMFFFRNLFQIVFVLAVICYSS 1056

  Fly   873 PYYLILTLALAIIFYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAE 937
            |.::||.:.|..::.|.:.:|.:|||::|||::|.|||:|:|...::.||.||||...:...|:|
pombe  1057 PMFMILIVPLFFLYRYNQVYYTQTSRELKRLDSVTRSPLYAHFQESLGGLSTIRAYDMEDTFISE 1121

  Fly   938 FDNLQDLHSSGYYTFLATNRAFGYYLDCFCTLYIVIIILNYFI--------NPPQSPGEVGLAIT 994
            .|...|.:...::.:.::||.....::....|   ::..:.|.        ||  :.|.|||:::
pombe  1122 NDIRVDTNHRIWFLYFSSNRWQAIRVEAIGAL---VVFSSAFFGVLSAVRGNP--NSGLVGLSLS 1181

  Fly   995 QAMGMTGMVQWAMRQSAELENTMTAVERVVEYDEIEPEGEF---DSREGKKPSPSWPEKGEIIAE 1056
            .|:.:|..:.:.:|||.::|..:.:|||::||..:..|...   |.|    |...||..|.|..:
pombe  1182 YAVQITQSLTFVVRQSVDVETNIVSVERMLEYIGLPSEAPSIIPDHR----PPEGWPSHGAIKFD 1242

  Fly  1057 DLCLRYFPDPQAKYVLKALNFRIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIITIDERDTA 1120
            ...:||  ......||..::..|:|.||:|||||||||||:|..||||| ....|.|.:|:.:..
pombe  1243 HYSVRY--RENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINIT 1305

  Fly  1121 DMGLFDLRSKISIIPQEPVLFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKIS 1185
            .:||.||||:::|||||...|.|::|.||||.....|.::|.|||...||..|..|..||.|:::
pombe  1306 SIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVT 1370

  Fly  1186 EGGSNFSVGQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLN 1250
            |||:|.|.|||||:||.||:|...|||::|||||.||.:|||::|.|||.:|.|.|:||||||:|
pombe  1371 EGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFNDRTILTIAHRIN 1435

  Fly  1251 TIMDSDRVLVMDAGHLVEFGSPYELLTSSESKIFHGMVMETG 1292
            |:|||:|:||:|.|.:|||.|..:|| .:::.:|:.:..|:|
pombe  1436 TVMDSNRILVLDHGKVVEFDSTKKLL-ENKASLFYSLAKESG 1476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 MRP_assoc_pro 13..1292 CDD:188098 441/1340 (33%)
abc2NP_593943.3 MRP_assoc_pro 96..1477 CDD:188098 442/1342 (33%)

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