DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrp4 and abc4

DIOPT Version :10

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_594558.1 Gene:abc4 / 2543059 PomBaseID:SPAC30.04C Length:1469 Species:Schizosaccharomyces pombe


Alignment Length:1328 Identity:389/1328 - (29%)
Similarity:636/1328 - (47%) Gaps:174/1328 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PENPRERSSPLSSLMFCFAL------PVLFKGRKKTLEQKDLYRALKEHKSDSLGDRLCAAWDEQ 68
            ||:..:.|:.....||.||.      |::...:::.:|..|. ..:.::..:.       ||..:
pombe   219 PEDNYQPSAEQVCSMFNFACSYGYLNPLVLTAKRRVVEVDDT-PVIPDYDKNK-------AWTYR 275

  Fly    69 VAKNETPRLGRALTKVFGFHLFITGVFLLAQEFLTKVTQ---PICLIGVMAYFAGNDPDRSKAQL 130
            ..:.:||.|...:.|:|...:...||    ..|:..|.|   ||.|..::.:............:
pombe   276 FERMKTPSLFITIHKIFWRQILGMGV----SSFMVSVCQFLSPIALNRLLKHLESPSSSSVNPLV 336

  Fly   131 WAAGLIAGSVFSVCIGHPYMLGL---LHLGMKMR------IALSSLIYRKAL--RLSRTALGDTT 184
            |...|:.|         |::..|   .:|.|..|      ..|...||.|.:  |..:...||:.
pombe   337 WIVLLLTG---------PFLTSLFTQFYLFMSTRYLARSYTTLVQQIYNKVIRSRFVQNKSGDSK 392

  Fly   185 VGQVVNLLSNDVGRFDLVLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLFLPFQSYLG 249
            ||:..||:|.||.....:...:|.:..||:|:....||:...:|.|:..|:|:.:|.......||
pombe   393 VGRSNNLISTDVDDIGEIREFIHIIVRAPVEIAGSIYLLQKLLGWSAYVGLALTVLTCSVPIVLG 457

  Fly   250 KRTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWEKPF------GKVVEMTRFNEML----CI 304
            ...:.|.||....||.|:.:|:|::..|::.|.:.||.|.      .:.||:.|..::|    ||
pombe   458 PLVAKLTLRANRATDSRIELMSELLQSIRITKFFGWELPMLDRVKQRRQVELNRTWKLLLMEICI 522

  Fly   305 KQVNYIRGILISFAMFLSRIFTSSSLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISE 369
            :.:.....:...||.|:  :||:       ::|..:....||...:.::.:|...: :....:.:
pombe   523 QVLVESLPVFSMFATFV--VFTT-------IMGQTITPSIAFTSISLFSFIRTQFS-WIAYLMRQ 577

  Fly   370 FAELLVSVRRLEAFMHRPETKVRDKSKVKNANQKAESPNGDSPKGNGIPENLIEFSQFQARWESH 434
            ..::.||:.|:..|::.|: :|...:.:::.:|:                  |.|......|.|:
pombe   578 IVQIFVSIGRVSDFLNDPD-EVDPVNTIEDTSQE------------------IGFFNASLTWVSN 623

  Fly   435 SLEPT-----LEDINLQLGRRKLVAVIGPVGAGKSSLIQAILGELPGESGTLRINGS--YSYAAQ 492
               |:     |.|:|:...|.||..||||.|:||||||.|:||||....|:..:..|  .||.:|
pombe   624 ---PSPGDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQ 685

  Fly   493 EPWLFTGTVRQNILFGLDWDKHRYRTVVKKCALERDFELLPFGDKTIVGERGASLSGGQKARISL 557
            .|||...|:|.||||...:.:.||:.|::.|.|..|.:.....|.|.:||:|.:||||||.||:|
pombe   686 VPWLRNATIRDNILFDYPYIEERYKKVIQACGLLTDLQSFVASDLTEIGEKGVTLSGGQKQRIAL 750

  Fly   558 ARAVYRRADIYLLDDPLSAVDTHVGRHLFDQCMRGYL-RSELVILVTHQLQ-FLEQADLIVIMDK 620
            |||||....|.|:||..||:|.|....::..|.:..| .:..||||||.:. |::.|..||.:..
pombe   751 ARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHNVHLFMDSAAFIVTVKN 815

  Fly   621 GR------------ISAMGTYSSMKRSGLDFAQLLTAPNK--DAEDLDEIDGAGGDGLDLLNVPS 671
            |.            ..|....|:.:.:..|.| .:..||:  |||..||.||             
pombe   816 GSAFPVTDKSSPLLFLAEQAASASEAAAPDLA-AIPIPNEVDDAEAADEKDG------------- 866

  Fly   672 LSRRGSKNSKPSTRNNSFTSLSSMAESMAQEASLQMQETRVEGKIGLGLYKEYLTSGSSWFMIFF 736
                                            .|..:|.||.|.:.......|:....|.|.:..
pombe   867 --------------------------------KLVEEEQRVTGDVVFSEIFSYMKHFGSGFYVAA 899

  Fly   737 MVFLCLATQILCSAADYFLSYWVDKNVDGQTDINTDPQDMYYFAALNVAVVVFTIVRTMLFYKMA 801
            ::...:.||......|.::::|.:.:|: ..|:|.: :.::.:..:.:|..:...:||:.:.:.|
pombe   900 VLLFFVTTQATSILIDLWVAFWTNSSVN-SPDVNNN-KFLFVYGTMLLAYSLLDFLRTVSYDRGA 962

  Fly   802 MRSSTQLHNAMYQGITRAAMYFFNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIV 866
            ..:|.:||::|.:.:......:|:..|:|||:|||:||:..:|..|...:...:..||::.|.|:
pombe   963 WWASRKLHDSMLESVFGTFASWFDKTPTGRIVNRFAKDIRSIDMNLSGWLFFSINCFLSVAGGIL 1027

  Fly   867 VICITNPYYLILTLALAIIFYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQ 931
            .:....|.::|..:.:.:..||....|.:....||||.::..|||:|.|..:|.|:..|||...|
pombe  1028 SVSSAMPIFMIPAVIVCLAGYYFGLLYTRAQVGVKRLISIYTSPIFSLLGESIVGVSVIRAFNRQ 1092

  Fly   932 ---KELIAE-FDNLQDLHSSGYYTFLATNRAFGYYLDCFCTLYIVIIILNYFINPPQSPGEVGLA 992
               |::.:| .|||..|.|:.|    ..||......|....|...|..|...:....|||.||.:
pombe  1093 TIFKQMFSERLDNLVRLQSTSY----NLNRWVAVRTDGISGLVGAIAGLIALLQKDLSPGVVGFS 1153

  Fly   993 ITQAMGMTGMVQWAMRQSAELENTMTAVERVVEYDEIEPEGEFDSREGKKPSPSWPEKGEIIAED 1057
            :.||:..:..|...:|....|:..|.:.|||:||.:: |:....:..|:.|: :||::|:|:...
pombe  1154 LNQAVIFSSSVLLFVRSCNSLQAEMNSYERVLEYSKL-PQEPAPTIAGQVPA-TWPKEGDIVFNH 1216

  Fly  1058 LCLRYFPDPQAKYVLKALNFRIRPCEKVGIVGRTGAGKSSLINALFRLSYN-EGIITIDERDTAD 1121
            :.:.|  ......:||.:|..|.|.|||.:|||||:|||:|...|.|.::. .|.|.|:.|:|..
pombe  1217 VSVSY--SAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQS 1279

  Fly  1122 MGLFDLRSKISIIPQEPVLFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLI-------SELPNG 1179
            :.|..||.:||.|||:|:||||::|.|||||:|..|..|.:||:......:|       ..:...
pombe  1280 VNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHIT 1344

  Fly  1180 LQSKISEGGSNFSVGQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLT 1244
            |.:.::..|||||.||:|::.|||||:|.::::::||.||:||...|..||.|:|..|.|.|:|.
pombe  1345 LDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREAFGDATMLC 1409

  Fly  1245 IAHRLNTIMDSDRVLVMDAGHLVEFGSP 1272
            |||||.||:|.|:|:|:|.|.|||:|.|
pombe  1410 IAHRLKTIVDYDKVMVLDKGVLVEYGPP 1437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 MRP_assoc_pro 13..1292 CDD:188098 387/1325 (29%)
abc4NP_594558.1 MRP_assoc_pro 277..1456 CDD:188098 377/1262 (30%)

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