DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and si:ch211-119o8.6

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001108212.1 Gene:si:ch211-119o8.6 / 556659 ZFINID:ZDB-GENE-070912-17 Length:735 Species:Danio rerio


Alignment Length:554 Identity:133/554 - (24%)
Similarity:202/554 - (36%) Gaps:130/554 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QDSVYLSETVTMELDPLSGEEKLEELQKCRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWI 203
            :|||.|.....:..:.|....:|.:..:|..|            |.:...||||.|:.      |
Zfish    19 KDSVVLRCLHCLCKNCLQSYWELNKSLECPVC------------LKETRCSVLLHHLS------I 65

  Fly   204 SHKPDEPRL-----MCPACKSALDQAIDFREMCIS------TELKLSQAKPSTDEVQIEAENENP 257
            |....|...     ..|.....|:..:...|..||      ..:|..:...:..::.:|.:.|..
Zfish    66 SRFASEGEFSQDSNFKPLHVGNLESEMQLEETTISQVMSTIPRIKTEEDMTTIVQMLMETKYEPV 130

  Fly   258 ISSDHDLISDTENTNVEEIEDAGGDHVEDEATSDD-------QTSQEAVDEVAESPAAQDP-LSV 314
            .:|..|||......::..::....:.|.:|....|       .||...:.|..:|  .:.| ||.
Zfish   131 ETSIDDLIYTPTIEDISSVKREPSNEVSNEEIHRDLMIHDTVPTSSSVLTEPNDS--GEPPHLST 193

  Fly   315 ALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAAGEQKPKR-SANPKTKEERN------- 371
            ....:..:..|....||...|       .|..:|.||....|||.: |...|:..:|:       
Zfish   194 TTTCRSLRSNLCLKCGKSFER-------KSDLRAHEKVHSLQKPHQCSTCGKSYVDRHELSMHER 251

  Fly   372 ----------------LIRRAQLR--------AKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKN 412
                            .:|.:.|:        .||  |.|.|||::|.....|..|:..|.....
Zfish   252 LHTGEKLFDCSYCKKKFVRESALKYHLRSHTGEKP--FSCSQCGKSFSRRSTLNTHLRLHMGPLP 314

  Fly   413 YQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVH---NAAPRLIVK 474
            :||..|.|.|..|.....| |..|.||.||.|..|.:.|.:     |.|.|||   :|..:....
Zfish   315 HQCDHCGKLFNTAAAMRAH-RATHTGERPFPCPQCDKKFIF-----KAELEVHLDGHAGNKPFKC 373

  Fly   475 RINPKPMPKPRESVRYQ----------CKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSD 529
            .:..|...:.:|...:|          |..|...:.....|..|:|.|...:.:||..|.||:..
Zfish   374 SVCGKGFLRKQECNVHQTIHQDKRSFHCTYCDNSFKRLSHLTSHLKIHYPESPHKCTYCEKSFKH 438

  Fly   530 PNKLKRHEMTHE-KRPLQCDVCLKGF---YQRTR-------------------------LREHEL 565
            ||.||.||..|. ::|..|:.|.|.|   ..|||                         |:.|::
Zfish   439 PNSLKLHERLHTGEKPYSCEHCGKRFPSSGDRTRHLAVHSEVKSYKCPKCDRRFRFKNSLQSHQV 503

  Fly   566 IHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQD 599
            :||||||:.|:.|:.:|....|:|:|  |.:|.:
Zfish   504 MHTGERPFHCKKCDRDFARLANLKAH--SVVHTE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262 17/85 (20%)
zf-C2H2 385..407 CDD:395048 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 10/19 (53%)
C2H2 Zn finger 547..567 CDD:275368 9/47 (19%)
zf-met 573..597 CDD:463736 7/23 (30%)
C2H2 Zn finger 575..591 CDD:275368 5/15 (33%)
si:ch211-119o8.6NP_001108212.1 RING_Ubox 9..50 CDD:473075 7/30 (23%)
C2H2 Zn finger 205..225 CDD:275370 7/26 (27%)
C2H2 Zn finger 233..253 CDD:275368 3/19 (16%)
COG5048 257..676 CDD:227381 80/289 (28%)
C2H2 Zn finger 261..281 CDD:275368 2/19 (11%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..337 CDD:275368 7/20 (35%)
C2H2 Zn finger 345..362 CDD:275368 7/21 (33%)
C2H2 Zn finger 373..393 CDD:275368 3/19 (16%)
C2H2 Zn finger 401..421 CDD:275368 5/19 (26%)
C2H2 Zn finger 429..449 CDD:275368 10/19 (53%)
C2H2 Zn finger 457..477 CDD:275368 7/19 (37%)
C2H2 Zn finger 485..505 CDD:275368 2/19 (11%)
C2H2 Zn finger 513..533 CDD:275368 7/21 (33%)
C2H2 Zn finger 541..561 CDD:275368
C2H2 Zn finger 569..589 CDD:275368
C2H2 Zn finger 597..614 CDD:275368
C2H2 Zn finger 626..647 CDD:275368
C2H2 Zn finger 655..675 CDD:275368
C2H2 Zn finger 683..703 CDD:275368
C2H2 Zn finger 711..731 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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