DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and CG4424

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:467 Identity:106/467 - (22%)
Similarity:166/467 - (35%) Gaps:146/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 EEKLEELQKCRTCYNDFTAD----FRAKDLFDPANSVLLFHIEVISGVWISHKPDE---PRLMCP 215
            |.:|..:..||||..|..|.    |:..|...|....|...||.:||:.|.....|   |..:|.
  Fly     2 EIRLNMMTLCRTCLQDGEAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICL 66

  Fly   216 ACKSALDQAIDFREMCISTELKLSQAKPSTDEVQIEAENENPISSDHDLISDTENTNVEEIEDAG 280
            .||:.|..|..||::|       .::.....|..|:...|..:..  :::..|..:....||...
  Fly    67 RCKAFLTLAHKFRQIC-------QRSNEFLREYVIKDAVEQGVVK--EVVQQTRPSTPPPIETEQ 122

  Fly   281 GDHVEDEATSDD-QTSQEAVDEVAESPAAQDPLSVALGAKIFKELLD-QYTGKEKARLRKGAPIA 343
            .:..|||...:. .::::.::|....||.::..:|     :..|:|. .|.          .|.:
  Fly   123 LEPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTV-----LTVEMLPAPYP----------PPAS 172

  Fly   344 SKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHT 408
            :.|.|   .||..|.|.                        .||..||..:.....|..||.||.
  Fly   173 TPPPA---PAGAVKGKL------------------------HVCAICGNGYPRKSTLDTHMRRHN 210

  Fly   409 RTKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIV 473
            ..:.|:|..|.|:|:                                                  
  Fly   211 DERPYECEICHKSFH-------------------------------------------------- 225

  Fly   474 KRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEM 538
                          |.||.|.             ||:.||.|..|.||.|.::::|...|.:||.
  Fly   226 --------------VNYQLKR-------------HIRQHTGAKPYTCQYCQRNFADRTSLVKHER 263

  Fly   539 TH-EKRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQDNAR 602
            || .:||..|..|.|.|...:.|:.|...||||:|:.|::||.:|...:|:.:|..::.|.::.|
  Fly   264 THRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPR 328

  Fly   603 --------KLGV 606
                    |:|:
  Fly   329 LTAYLSTFKVGI 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262 25/81 (31%)
zf-C2H2 385..407 CDD:395048 7/21 (33%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..436 CDD:275368 4/20 (20%)
C2H2 Zn finger 444..460 CDD:275368 0/15 (0%)
C2H2 Zn finger 492..512 CDD:275368 3/19 (16%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 6/19 (32%)
zf-met 573..597 CDD:463736 6/23 (26%)
C2H2 Zn finger 575..591 CDD:275368 5/15 (33%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 25/88 (28%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
COG5048 210..>345 CDD:227381 47/208 (23%)
C2H2 Zn finger 217..237 CDD:275368 10/96 (10%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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