Protein Alignment cu and noct

DIOPT Version :10

• Sequence 1: NP_001097746.1
• Gene: cu / 41339
• FlyBaseID: FBgn0261808
• Length: 642
• Species: Drosophila melanogaster
• Sequence 2: NP_001016531.1
• Gene: noct / 549285
• XenbaseID: XB-GENE-1014542
• Length: 458
• Species: Xenopus tropicalis
• Alignment Length: 363
• Identity: 165/363 - (45%)
• Similarity: 208/363 - (57%)
• Gaps: 29/363 - (7%)

  Fly   250 STPALLQHVQQLRGGGIEQPSLLTRGFLKPLLADEDVA--DGLRCLKLNSVSRVCSAPVEGDDIR 312
            |:.|:.||.:.|.....:|...|..   |.||.:..||  |....|..:.||....:..:....|
 Frog   110 SSAAVSQHQELLETPDHDQSESLDP---KDLLEECQVALQDRPARLHRDLVSLRNDSGSQPRSFR 171

  Fly   313 LLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYLIVQEILQNQPDVICLQEVDH-FKFLQTVLGS 376
            ::|||||:|.||:..|.|:.||.|||.||.|||||::|||..||||:||||||| |...|.:|..
 Frog   172 VMQWNILAQALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQEVDHYFDTFQPILSR 236

  Fly   377 QNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYKRDKLQLQGYDTRILEVWRVQSNQVAIAARLRMR 441
            ..|...|..||.||||.:|.||||||||:|:.:|:.:|.......|....:::||||||..|:..
 Frog   237 LGYQCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFRLVNSAKIRLSARTLKTNQVAIAETLQCC 301

  Fly   442 SSGREFCVATTHLKARHGALLAKLRNEQGRDLIRFVKQFA-GDT-PLLLCGDFNAEPVEPIYATI 504
            .:||..|.|.||||||.|  ..:.|..||.||:..::... |.| ||::||||||||.|.:|...
 Frog   302 ETGRLLCFAVTHLKARTG--WERFRLAQGSDLLHNLESITEGATVPLIICGDFNAEPTEEVYKRF 364

  Fly   505 LGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEECHTIDYVFYTP 569
            .... |.|.|||   ||..|:        ||       .||||||||||..||.|||:||::|:.
 Frog   365 ASSS-LNLNSAY---KLLSED--------GE-------SEPPYTTWKIRPTGESCHTLDYIWYSQ 410

  Fly   570 DRLKIKNCLDFPAGEQIGKNRTPSFQYPSDHFSLVCDF 607
            ..|::.:.|..|..||||.||.|||.|||||.||||||
 Frog   411 HALRVNSALGLPTEEQIGPNRLPSFNYPSDHLSLVCDF 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cu	NP_001097746.1	EEP	312..609	CDD:469791	149/299 (50%)
noct	NP_001016531.1	Deadenylase_nocturnin	171..450	CDD:197330	149/299 (50%)