DRSC/TRiP Functional Genomics Resources

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Protein Alignment Leash and rnh-1.2

DIOPT Version :10

Sequence 1:NP_650037.2 Gene:Leash / 41320 FlyBaseID:FBgn0037856 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496121.2 Gene:rnh-1.2 / 191471 WormBaseID:WBGene00014163 Length:192 Species:Caenorhabditis elegans


Alignment Length:80 Identity:22/80 - (27%)
Similarity:30/80 - (37%) Gaps:16/80 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LRIT---LDSADRVYFAGDIIRGEIWMNVNKRTKIRAIKVQVTGKGKCKWMEILRK--NSNNNEY 65
            ||||   |....|.:.....|...:      ..||..:|...|....|:...:.:|  .||.|:|
 Worm   115 LRITPGILSKISRSFVPSTAISESL------DVKIEYVKGHHTNFFNCEADRLAKKACRSNINQY 173

  Fly    66 SRSL-----FYTSKE 75
            :|.|     .|.|.|
 Worm   174 NRYLKNKSNMYASFE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LeashNP_650037.2 Arrestin_N 6..152 CDD:451447 22/80 (28%)
Arrestin_C 191..308 CDD:214976
rnh-1.2NP_496121.2 RNase_H_like 8..167 CDD:449355 13/57 (23%)
Blue background indicates that the domain is not in the aligned region.

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